C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemicentin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487727 HMCN2-003 ENSG00000148357 9606 + 9:130384449-130419582 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyOvaryENST00000487727
Transcript ID Adipose Bladder Brain Kidney Ovary
ENST00000487727 0.460±0.00 0.028±0.00 0.020±0.00 0.226±0.00 0.582±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XH CIL_0004XH_0001 CGP 9:130172578-130434123
CIL_000936 CIL_000936_0001 VISTA 9:130178260-130779710
CIL_0005UI CIL_0005UI_0001 CGP 9:130265882-130501274

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113532 Hmcn2-001 protein_coding Mus_musculus 0 1890

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