C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148357-ENSG00000130707 CGP 9606 9:130265882-130501274
GeneTranscriptPositionBiotype
ENSG00000130707 (ASS1)
argininosuccinate synthase 1 		ENST00000352480 (ASS1-002) 130444929-130501274 protein_coding
ENST00000372386 (ASS1-001) 130479856-130501178 processed_transcript
ENST00000372393 (ASS1-003) 130444988-130501255 protein_coding
ENST00000372394 (ASS1-004) 130444962-130501274 protein_coding
ENST00000422569 (ASS1-005) 130444992-130471513 protein_coding
ENST00000443588 (ASS1-010) 130452223-130471514 protein_coding
ENST00000467695 (ASS1-009) 130458518-130479898 retained_intron
ENST00000470849 (ASS1-008) 130476549-130489421 retained_intron
ENST00000492400 (ASS1-007) 130476284-130489429 processed_transcript
ENST00000493984 (ASS1-006) 130466474-130489404 retained_intron
ENSG00000148357 (HMCN2)
hemicentin 2 		ENST00000428715 (HMCN2-004) 130425716-130431438 protein_coding
ENST00000480829 (HMCN2-002) 130398642-130407252 retained_intron
ENST00000487727 (HMCN2-003) 130384449-130419582 nonsense_mediated_decay
ENST00000611173 (HMCN2-201) 130307519-130338606 protein_coding
ENST00000623487 (HMCN2-005) 130429166-130434121 retained_intron
ENST00000624552 (HMCN2-001) 130265882-130434123 protein_coding
ENSG00000264169 (RN7SL665P)
RNA, 7SL, cytoplasmic 665, pseudogene 		ENST00000578793 (RN7SL665P-201) 130400266-130400565 misc_RNA
CIL_0005UI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055632-ENSMUSG00000076441 CGP 10090 2:31314415-31520672
GeneTranscriptPositionBiotype
ENSMUSG00000055632 (Hmcn2)
hemicentin 2 		ENSMUST00000113532 (Hmcn2-001) 31314415-31460738 protein_coding
ENSMUST00000130375 (Hmcn2-002) 31400277-31405814 protein_coding
ENSMUST00000138821 (Hmcn2-003) 31438062-31460724 retained_intron
ENSMUST00000141294 (Hmcn2-005) 31454708-31457989 retained_intron
ENSMUST00000142448 (Hmcn2-004) 31446735-31460737 processed_transcript
ENSMUSG00000076441 (Ass1)
argininosuccinate synthetase 1 		ENSMUST00000102840 (Ass1-001) 31470207-31520672 protein_coding
ENSMUST00000126474 (Ass1-002) 31497772-31510155 processed_transcript
ENSMUST00000130195 (Ass1-003) 31518490-31520531 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UI_0001ENSG00000130707ENST00000352480ENST00000372386ENST00000372393ENST00000372394ENST00000422569ENST00000443588ENST00000467695ENST00000470849ENST00000492400ENST00000493984ENSG00000148357ENST00000428715ENST00000480829ENST00000487727ENST00000611173ENST00000623487ENST00000624552ENSG00000264169ENST00000578793CIL_0005UI_0002ENSMUSG00000055632ENSMUST00000113532ENSMUST00000130375ENSMUST00000138821ENSMUST00000141294ENSMUST00000142448ENSMUSG00000076441ENSMUST00000102840ENSMUST00000126474ENSMUST00000130195
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UI_0001ENSG00000130707ENST00000352480ENST00000372386ENST00000372393ENST00000372394ENST00000443588ENST00000492400ENSG00000148357ENST00000428715ENST00000480829ENST00000487727ENST00000611173ENST00000623487ENST00000624552ENSG00000264169ENST00000578793CIL_0005UI_0002ENSMUSG00000055632ENSMUST00000113532ENSMUST00000138821ENSMUST00000142448ENSMUSG00000076441ENSMUST00000102840
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130707 ENST00000352480 146.567±0.00 18.213±0.00 52.868±0.00 5.170±0.10 56.876±49.22 21.836±13.92 5.316±4.84 145.830±80.78 141.726±134.27 32.977±30.18 12.966±11.13 46.329±16.19 38.117±10.27 35.433±25.54
ENST00000372386 82.776±0.00 14.534±0.00 N/A 17.624±0.00 48.035±0.00 40.843±0.00 N/A 165.350±0.00 186.036±0.00 20.497±0.00 N/A 30.052±10.61 N/A 52.486±0.00
ENST00000372393 N/A 14.381±0.00 N/A 10.633±0.00 38.403±0.00 10.372±0.00 4.883±0.00 80.646±0.00 N/A N/A N/A 23.384±6.40 17.804±2.07 13.816±7.53
ENST00000372394 N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.490±0.00 N/A N/A N/A
ENST00000467695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492400 N/A N/A N/A 5.936±0.00 N/A N/A 0.867±0.00 N/A N/A 2.759±0.00 N/A N/A N/A N/A
ENST00000493984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148357 ENST00000428715 N/A N/A N/A 0.212±0.00 2.951±0.00 5.498±0.00 N/A 1.135±0.00 0.358±0.00 N/A N/A N/A N/A 12.553±0.00
ENST00000480829 N/A N/A N/A 0.037±0.02 N/A N/A N/A N/A N/A 1.162±0.00 N/A 0.165±0.00 0.063±0.00 N/A
ENST00000487727 0.460±0.00 N/A 0.028±0.00 0.020±0.00 N/A N/A N/A 0.226±0.00 N/A N/A N/A 0.582±0.14 N/A N/A
ENST00000611173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A
ENST00000623487 N/A N/A N/A N/A N/A N/A N/A 0.152±0.00 0.089±0.00 N/A N/A 0.292±0.00 N/A N/A
ENST00000624552 0.544±0.00 1.764±0.00 0.066±0.00 N/A 0.330±0.09 1.403±0.00 0.154±0.00 0.053±0.00 0.035±0.00 N/A 1.024±0.26 0.234±0.17 0.088±0.00 2.909±0.00
ENSG00000264169 ENST00000578793 0.129±0.00 N/A N/A 0.229±0.00 0.435±0.00 0.260±0.00 N/A N/A N/A 0.137±0.00 0.062±0.00 N/A N/A 0.126±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055632 ENSMUST00000113532 7.137±3.67 0.383±0.14 2.531±0.00 0.042±0.01 1.251±0.55 11.480±4.54 1.389±0.38 0.152±0.01 N/A 0.653±0.05 0.832±0.54 3.090±1.62 0.095±0.06 0.347±0.13
ENSMUST00000130375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138821 N/A N/A N/A N/A N/A N/A N/A 2.855±0.73 N/A N/A 4.284±0.96 3.711±0.00 1.294±0.36 N/A
ENSMUST00000141294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142448 27.067±18.90 0.594±0.07 16.659±2.30 N/A 10.490±6.82 44.681±11.46 4.385±1.26 1.849±0.29 0.154±0.10 3.384±0.05 3.416±0.00 13.093±3.95 1.880±0.99 0.797±0.08
ENSMUSG00000076441 ENSMUST00000102840 2.562±0.48 1.995±0.29 15.218±0.43 8.383±9.14 7.668±2.44 16.042±1.16 2.016±0.19 1012.391±60.53 916.296±774.85 7.433±0.66 0.801±0.19 13.775±2.59 153.113±38.89 17.198±1.67
ENSMUST00000126474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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