C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487828 RP11-262M14.2-001 ENSG00000242140 9606 + 3:181146233-181146463 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyENST00000487828
Transcript ID Adrenal Breast Heart Kidney
ENST00000487828 0.202±0.00 0.047±0.00 0.095±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MF CIL_0007MF_0001 UCNEbase 3:180719005-182597004
CIL_0008UV CIL_0008UV_0001 VISTA 3:180755851-181358014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190029 Matr3-007 protein_coding Mus_musculus 0 355
ENSMUST00000187389 Matr3-008 protein_coding Mus_musculus 0 355
ENSMUST00000188275 Matr3-006 protein_coding Mus_musculus 0 355
ENSMUST00000186796 Matr3-005 protein_coding Mus_musculus 0 355
ENSMUST00000188767 Matr3-004 nonsense_mediated_decay Mus_musculus 0 355
ENSMUST00000190121 Matr3-002 protein_coding Mus_musculus 0 355
ENSMUST00000190653 Matr3-003 protein_coding Mus_musculus 0 355
ENSMUST00000166793 Matr3-001 protein_coding Mus_musculus 0 355

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