C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptogyrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489206 SYNGR1-004 ENSG00000100321 9606 + 22:39350006-39376210 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyENST00000489206
Transcript ID Bladder Kidney
ENST00000489206 0.412±0.00 0.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CB CIL_0000CB_0001 CGP 22:39312882-39385588
CIL_0000A3 CIL_0000A3_0001 CGP 22:39349925-39437060

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009727 Syngr1-001 protein_coding Mus_musculus 0 455
ENSMUST00000009728 Syngr1-002 protein_coding Mus_musculus 0 455
ENSMUST00000143928 Syngr1-003 protein_coding Mus_musculus 0 285

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