C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489444 GBP3-005 ENSG00000117226 9606 - 1:89006680-89022778 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000489444
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000489444 0.395±0.00 2.242±0.00 1.036±0.00 1.128±0.06 4.072±0.00 0.482±0.00 3.104±2.40 0.478±0.00 4.151±2.51 1.248±0.57 0.631±0.08 1.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_0003 CGP 1:89006666-89065360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165774 Gbp2-001 protein_coding Mus_musculus 0 582
ENSMUST00000169572 Gbp2-002 nonsense_mediated_decay Mus_musculus 0 348
ENSMUST00000045097 Gbp7-201 protein_coding Mus_musculus 0 265
ENSMUST00000171263 Gbp7-202 protein_coding Mus_musculus 0 265

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