C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane and tetratricopeptide repeat containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489713 TMTC4-010 ENSG00000125247 9606 - 13:100624910-100638808 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungOvaryENST00000489713
Transcript ID Brain Kidney Lung Ovary
ENST00000489713 1.433±0.00 0.487±0.00 0.212±0.00 0.747±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NV CIL_0005NV_0001 CGP 13:100530164-100675093
CIL_0000WK CIL_0000WK_0001 CGP 13:100603927-101416492

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135917 Tmtc4-002 retained_intron Mus_musculus 0 1134
ENSMUST00000148661 Tmtc4-004 protein_coding Mus_musculus 0 1125
ENSMUST00000126867 Tmtc4-005 protein_coding Mus_musculus 0 1125
ENSMUST00000037726 Tmtc4-001 protein_coding Mus_musculus 0 1125
ENSMUST00000143189 Tmtc4-003 nonsense_mediated_decay Mus_musculus 0 448
ENSMUST00000126494 Tmtc4-007 processed_transcript Mus_musculus 0 446
ENSDART00000078681 tmtc4-201 protein_coding Danio_rerio 5.60519e-45 187
ENSDART00000127214 tmtc4-001 protein_coding Danio_rerio 5.60519e-45 187

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