C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159823 Rps6kc1-003 ENSMUSG00000089872 10090 - 1:190796069-190844584 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000159823
Transcript ID Adipose Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000159823 0.665±0.00 0.938±0.00 0.219±0.00 0.262±0.00 0.232±0.03 0.451±0.06 0.332±0.00 0.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J3 CIL_0007J3_0002 UCNEbase 1:189990273-190853986
CIL_0009A8 CIL_0009A8_0002 VISTA 1:190353740-190955122
CIL_00092Y CIL_00092Y_0002 VISTA 1:190427303-191030173

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366959 RPS6KC1-002 protein_coding Homo_sapiens 0 857
ENST00000366960 RPS6KC1-001 protein_coding Homo_sapiens 0 857
ENST00000490299 RPS6KC1-003 processed_transcript Homo_sapiens 0 857
ENST00000491616 RPS6KC1-005 processed_transcript Homo_sapiens 0 870
ENST00000543354 RPS6KC1-201 protein_coding Homo_sapiens 0 857
ENST00000543470 RPS6KC1-202 protein_coding Homo_sapiens 0 880
ENST00000614059 RPS6KC1-203 protein_coding Homo_sapiens 0 880
ENST00000615329 RPS6KC1-204 protein_coding Homo_sapiens 0 619

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