C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490447 YIPF3-014 ENSG00000137207 9606 - 6:43512159-43516972 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLungENST00000490447
Transcript ID Brain Breast Colon Kidney Lung
ENST00000490447 2.797±0.00 2.289±0.00 4.090±0.00 3.158±0.00 3.724±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540
CIL_0005N0 CIL_0005N0_0001 CGP 6:43509702-43529585

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095263 Yipf3-001 protein_coding Mus_musculus 0 1199
ENSMUST00000151488 Yipf3-002 retained_intron Mus_musculus 0 894
ENSMUST00000127378 Yipf3-004 protein_coding Mus_musculus 0 684
ENSMUST00000123311 Yipf3-003 protein_coding Mus_musculus 0 673
ENSMUST00000145371 Yipf3-005 processed_transcript Mus_musculus 3.9937e-43 180

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