C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005N0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171453-ENSG00000171453 CGP 9606 6:43509702-43529585
GeneTranscriptPositionBiotype
ENSG00000124571 (XPO5)
exportin 5 		ENST00000265351 (XPO5-001) 43522330-43576075 protein_coding
ENST00000398799 (XPO5-010) 43570930-43575985 nonsense_mediated_decay
ENST00000398835 (XPO5-013) 43528159-43547675 nonsense_mediated_decay
ENST00000424378 (XPO5-011) 43551324-43559062 processed_transcript
ENST00000450462 (XPO5-004) 43527186-43528867 retained_intron
ENST00000455285 (XPO5-015) 43524534-43528913 protein_coding
ENST00000455854 (XPO5-009) 43522337-43526625 retained_intron
ENST00000486936 (XPO5-005) 43524534-43528204 nonsense_mediated_decay
ENST00000488195 (XPO5-006) 43524477-43527064 retained_intron
ENST00000496341 (XPO5-012) 43549534-43562333 nonsense_mediated_decay
ENST00000513451 (XPO5-007) 43547686-43548470 retained_intron
ENST00000612911 (XPO5-014) 43533353-43547681 retained_intron
ENSG00000171453 (POLR1C)
polymerase (RNA) I polypeptide C, 30kDa 		ENST00000304004 (POLR1C-006) 43517089-43529585 protein_coding
ENST00000372344 (POLR1C-005) 43517088-43521506 protein_coding
ENST00000372389 (POLR1C-008) 43517022-43521526 protein_coding
ENST00000423780 (POLR1C-007) 43517112-43520312 protein_coding
ENST00000428025 (POLR1C-009) 43509702-43520310 protein_coding
ENST00000455605 (POLR1C-010) 43517133-43521494 retained_intron
ENST00000481352 (POLR1C-004) 43517054-43521479 retained_intron
ENST00000488601 (POLR1C-001) 43517098-43520703 retained_intron
ENST00000512472 (POLR1C-002) 43517083-43519733 retained_intron
ENSG00000204052 (LRRC73)
leucine rich repeat containing 73 		ENST00000372441 (LRRC73-001) 43506969-43510686 protein_coding
ENSG00000271754 (RP3-337H4.9)
 ENST00000607571 (RP3-337H4.9-001) 43519180-43519724 antisense
CIL_0005N0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067148-ENSMUSG00000071074 CGP 10090 17:46243920-46252537
GeneTranscriptPositionBiotype
ENSMUSG00000067148 (Polr1c)
polymerase (RNA) I polypeptide C 		ENSMUST00000087026 (Polr1c-001) 46243920-46248054 protein_coding
ENSMUST00000124126 (Polr1c-002) 46247299-46247968 retained_intron
ENSMUST00000124655 (Polr1c-005) 46244101-46246573 protein_coding
ENSMUST00000142706 (Polr1c-004) 46244613-46247968 protein_coding
ENSMUST00000152583 (Polr1c-003) 46244524-46247932 retained_intron
ENSMUST00000173232 (Polr1c-007) 46244933-46247968 nonsense_mediated_decay
ENSMUST00000173349 (Polr1c-008) 46244835-46247968 protein_coding
ENSMUST00000174392 (Polr1c-006) 46245262-46247967 retained_intron
ENSMUSG00000071074 (Yipf3)
Yip1 domain family, member 3 		ENSMUST00000095263 (Yipf3-001) 46248080-46252537 protein_coding
ENSMUST00000123311 (Yipf3-003) 46248125-46251488 protein_coding
ENSMUST00000127378 (Yipf3-004) 46249029-46251904 protein_coding
ENSMUST00000145371 (Yipf3-005) 46250089-46250993 processed_transcript
ENSMUST00000149989 (Yipf3-006) 46251341-46252017 processed_transcript
ENSMUST00000151488 (Yipf3-002) 46248145-46252001 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N0_0001ENSG00000124571ENST00000265351ENST00000398799ENST00000398835ENST00000424378ENST00000450462ENST00000455285ENST00000455854ENST00000486936ENST00000488195ENST00000496341ENST00000513451ENST00000612911ENSG00000171453ENST00000304004ENST00000372344ENST00000372389ENST00000423780ENST00000428025ENST00000455605ENST00000481352ENST00000488601ENST00000512472ENSG00000204052ENST00000372441ENSG00000271754ENST00000607571CIL_0005N0_0002ENSMUSG00000067148ENSMUST00000087026ENSMUST00000124126ENSMUST00000124655ENSMUST00000142706ENSMUST00000152583ENSMUST00000173232ENSMUST00000173349ENSMUST00000174392ENSMUSG00000071074ENSMUST00000095263ENSMUST00000123311ENSMUST00000127378ENSMUST00000145371ENSMUST00000149989ENSMUST00000151488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N0_0001ENSG00000124571ENST00000265351ENST00000398835ENST00000455854ENST00000612911ENSG00000171453ENST00000304004ENST00000372344ENST00000372389ENST00000423780ENST00000428025ENST00000455605ENST00000481352ENST00000488601ENSG00000204052ENST00000372441ENSG00000271754ENST00000607571CIL_0005N0_0002ENSMUSG00000067148ENSMUST00000087026ENSMUST00000124655ENSMUST00000142706ENSMUST00000152583ENSMUST00000173232ENSMUST00000174392ENSMUSG00000071074ENSMUST00000095263ENSMUST00000123311ENSMUST00000127378ENSMUST00000149989ENSMUST00000151488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124571 ENST00000265351 4.163±0.00 2.431±0.00 0.440±0.00 2.164±0.15 3.023±1.29 2.850±0.00 1.562±1.46 4.446±0.00 1.291±0.82 3.467±0.00 4.429±0.00 9.311±5.72 4.918±0.28 17.696±4.81
ENST00000398799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.765±0.00 N/A N/A N/A
ENST00000424378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455854 N/A 1.072±0.00 0.411±0.00 N/A N/A N/A N/A N/A 0.923±0.00 N/A N/A N/A N/A N/A
ENST00000486936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612911 N/A N/A N/A N/A N/A N/A N/A N/A 2.779±0.00 N/A N/A N/A N/A N/A
ENSG00000171453 ENST00000304004 N/A N/A N/A N/A 2.144±0.30 2.170±0.00 0.755±0.00 1.737±1.20 N/A 1.820±0.00 N/A N/A N/A N/A
ENST00000372344 N/A 7.635±0.00 0.950±0.00 1.596±0.08 1.710±0.00 4.526±0.00 0.608±0.00 3.019±0.00 2.184±0.00 N/A 0.944±0.77 33.734±0.00 9.342±0.00 13.082±4.89
ENST00000372389 3.433±0.00 7.953±0.00 N/A 1.890±0.00 3.403±0.00 1.862±0.00 2.911±0.00 6.848±0.00 3.790±0.00 N/A 3.005±0.00 11.978±5.67 6.927±4.08 12.370±0.00
ENST00000423780 N/A N/A 5.171±0.00 3.166±0.00 N/A 6.754±0.00 N/A N/A 11.066±0.00 N/A 0.742±0.00 9.222±0.00 N/A N/A
ENST00000428025 N/A N/A N/A 6.131±0.00 7.305±0.00 7.970±0.00 1.544±0.00 4.505±0.00 N/A 1.253±0.00 1.100±0.00 24.051±14.21 11.975±0.00 36.418±0.00
ENST00000455605 N/A 3.292±0.00 N/A 0.733±0.00 0.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481352 N/A N/A N/A 0.811±0.00 0.932±0.00 0.809±0.00 N/A 1.107±0.00 0.773±0.00 N/A N/A N/A N/A N/A
ENST00000488601 1.129±0.00 N/A 2.259±0.00 N/A N/A N/A N/A N/A N/A 0.526±0.00 N/A 2.260±0.00 N/A N/A
ENST00000512472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204052 ENST00000372441 N/A N/A N/A 3.043±1.11 N/A N/A N/A N/A N/A 2.465±0.00 N/A N/A N/A 29.919±12.67
ENSG00000271754 ENST00000607571 N/A 8.246±0.00 N/A 2.515±0.00 N/A N/A 1.204±0.00 4.224±0.00 N/A N/A 1.382±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000067148 ENSMUST00000087026 15.389±4.47 13.094±0.00 30.742±4.54 32.457±17.93 8.748±1.78 10.855±0.60 6.836±1.70 24.715±4.28 21.483±13.60 14.342±0.90 6.052±0.43 17.803±10.72 21.088±9.98 27.820±8.51
ENSMUST00000124126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124655 9.009±0.00 N/A N/A N/A 3.861±0.29 6.046±0.07 3.537±0.58 N/A 6.630±5.02 7.559±0.00 N/A 11.529±2.69 13.466±8.24 N/A
ENSMUST00000142706 N/A N/A N/A N/A 4.930±1.27 7.697±2.26 2.640±0.00 10.758±1.67 4.143±0.63 5.417±0.00 N/A 13.458±0.00 9.055±0.00 N/A
ENSMUST00000152583 10.472±0.45 14.482±0.00 N/A N/A 7.988±3.30 8.494±0.24 2.414±0.00 11.244±3.47 N/A 7.233±1.77 N/A 22.639±4.54 N/A N/A
ENSMUST00000173232 N/A N/A N/A 15.561±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 20.226±9.87 19.530±0.00
ENSMUST00000173349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174392 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.960±0.00 N/A N/A N/A N/A
ENSMUSG00000071074 ENSMUST00000095263 18.504±5.90 55.151±20.21 20.814±0.95 12.713±6.83 19.636±7.95 49.204±17.62 9.002±2.04 20.446±3.30 14.949±6.09 38.251±10.58 2.891±0.82 35.027±15.67 7.396±0.46 8.434±4.02
ENSMUST00000123311 46.570±0.00 N/A 15.847±0.00 N/A 62.514±0.00 N/A N/A N/A 23.980±4.50 35.398±6.84 6.406±0.07 46.164±7.41 20.659±2.75 18.566±0.00
ENSMUST00000127378 N/A N/A N/A N/A 7.089±0.00 N/A N/A N/A N/A N/A 4.892±0.00 11.920±2.05 16.044±0.92 N/A
ENSMUST00000145371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149989 N/A 92.641±24.21 14.980±0.00 N/A 39.899±0.67 76.380±3.61 19.103±0.00 38.827±9.10 28.167±4.48 N/A 9.072±1.96 60.345±9.80 36.364±3.54 N/A
ENSMUST00000151488 15.809±3.44 N/A 17.139±1.86 12.227±4.08 13.782±3.56 N/A 5.989±0.43 N/A 6.351±1.24 11.776±1.33 5.825±1.83 17.522±3.71 20.701±11.14 8.532±1.86

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