C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490517 LRRC48-003 ENSG00000171962 9606 + 17:17972903-18016859 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLungMuscleOvaryTestisENST00000490517
Transcript ID Adipose Adrenal Breast Heart Kidney Lung Muscle Ovary Testis
ENST00000490517 0.223±0.00 0.849±0.00 0.397±0.00 0.147±0.00 1.156±0.00 1.426±0.00 0.425±0.00 0.701±0.35 2.159±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058R CIL_00058R_0002 CGP 17:17843511-18016889
CIL_0000DY CIL_0000DY_0001 CGP 17:17972813-18039209

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108722 Lrrc48-201 protein_coding Mus_musculus 0 407
ENSMUST00000108723 Lrrc48-001 protein_coding Mus_musculus 0 401

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