C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490751 LDB1-003 ENSG00000198728 9606 - 10:102110630-102120448 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLungOvaryPlacentaTestisENST00000490751
Transcript ID Breast Kidney Lung Ovary Placenta Testis
ENST00000490751 3.238±0.00 4.064±0.00 5.249±0.00 19.218±0.00 17.802±0.00 15.198±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WD CIL_0005WD_0001 CGP 10:102065390-102120453
CIL_00058F CIL_00058F_0001 CGP 10:102107560-102150331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185355 Ldb1-201 protein_coding Mus_musculus 0 1103
ENSMUST00000156585 Ldb1-007 protein_coding Mus_musculus 0 1103
ENSMUST00000152946 Ldb1-002 protein_coding Mus_musculus 0 1103
ENSMUST00000026252 Ldb1-001 protein_coding Mus_musculus 0 747
ENSMUST00000137771 Ldb1-004 protein_coding Mus_musculus 0 608
ENSMUST00000056931 Ldb1-003 protein_coding Mus_musculus 0 608
ENSMUST00000134015 Pprc1-005 processed_transcript Mus_musculus 0 274
ENSMUST00000136203 Ldb1-005 retained_intron Mus_musculus 0 263

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