C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491064 CTDSP1-014 ENSG00000144579 9606 + 2:218398256-218404418 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonENST00000491064
Transcript ID Bladder Brain Breast Colon
ENST00000491064 2.330±0.00 1.304±0.00 3.347±0.00 2.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VF CIL_0005VF_0001 CGP 2:218382029-218405941
CIL_000650 CIL_000650_0001 CGP 2:218398256-218453295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027367 Ctdsp1-001 protein_coding Mus_musculus 0 976
ENSMUST00000141175 Ctdsp1-002 retained_intron Mus_musculus 0 774
ENSMUST00000152659 Ctdsp1-003 protein_coding Mus_musculus 0 440

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