C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493587 VPS13B-005 ENSG00000132549 9606 + 8:99868057-99877580 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000493587
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000493587 1.029±0.00 2.430±0.00 1.459±0.00 1.835±0.00 2.539±0.00 0.832±0.00 1.306±0.00 2.035±0.77 1.151±0.27 2.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0001 CGP 8:98944403-99877580
CIL_00090P CIL_00090P_0001 VISTA 8:98972229-99575594
CIL_0006JN CIL_0006JN_0001 CGP 8:99013266-99894062

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048646 Vps13b-201 protein_coding Mus_musculus 0 568
ENSMUST00000155638 Cox6c-005 nonsense_mediated_decay Mus_musculus 0 342

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