C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 2, apoptosis-related cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493642 CASP2-002 ENSG00000106144 9606 + 7:143289588-143305822 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungTestisENST00000493642
Transcript ID Bladder Brain Colon Lung Testis
ENST00000493642 0.634±0.00 0.235±0.00 1.893±0.00 0.872±0.00 1.283±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VH CIL_0006VH_0001 CGP 7:143279957-143307696
CIL_0006VM CIL_0006VM_0001 CGP 7:143288215-143352083

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156829 Casp2-003 nonsense_mediated_decay Mus_musculus 0 1555
ENSMUST00000031895 Casp2-001 protein_coding Mus_musculus 0 1014
ENSMUST00000132398 Casp2-008 retained_intron Mus_musculus 0 652
ENSMUST00000139930 Casp2-004 retained_intron Mus_musculus 0 339
ENSMUST00000132246 Casp2-005 processed_transcript Mus_musculus 0 324
ENSMUST00000141669 Casp2-006 processed_transcript Mus_musculus 0 237
ENSMUST00000144821 Casp2-007 processed_transcript Mus_musculus 0 230

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