| Transcript ID | Ovary | Testis |
|---|---|---|
| ENST00000493662 | 1.942±0.12 | 1.941±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | MSH5-SAPCD1 readthrough (NMD candidate) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000493662  |
MSH5-SAPCD1-001 |
ENSG00000255152 |
9606 | + |
6:31740020-31764850  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005524 | IEA | ATP binding |
| GO:0006298 | IEA | mismatch repair |
| GO:0030983 | IEA | mismatched DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000097338
|
Msh5-008 | protein_coding | Mus_musculus | 0 | 2309 |
|
ENSMUST00000007250
|
Msh5-001 | protein_coding | Mus_musculus | 0 | 2309 |
|
ENSMUST00000174603
|
Msh5-007 | nonsense_mediated_decay | Mus_musculus | 0 | 2244 |
|
ENSMUST00000172536
|
Msh5-005 | nonsense_mediated_decay | Mus_musculus | 0 | 1537 |
|
ENSMUST00000174026
|
Msh5-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1234 |
|
ENSMUST00000174556
|
Msh5-004 | nonsense_mediated_decay | Mus_musculus | 0 | 531 |
|
ENSMUST00000174741
|
Msh5-012 | retained_intron | Mus_musculus | 0 | 529 |
|
ENSMUST00000165329
|
Msh5-002 | retained_intron | Mus_musculus | 0 | 529 |
