C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group I, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493757 NR1I2-005 ENSG00000144852 9606 + 3:119811076-119818484 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000493757
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000493757 0.007±0.00 0.007±0.00 0.113±0.00 0.054±0.00 0.048±0.00 3.216±0.00 7.425±0.00 0.088±0.00 0.705±0.55 0.025±0.01 0.052±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BS CIL_0005BS_0002 CGP 3:119703022-119818485
CIL_0005BP CIL_0005BP_0002 CGP 3:119780484-120094417

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023504 Nr1i2-001 protein_coding Mus_musculus 0 845
ENSDART00000061525 nr1i2-202 protein_coding Danio_rerio 8e-23 113
ENSDART00000123247 nr1i2-203 protein_coding Danio_rerio 8e-23 113
ENSDART00000017326 nr1i2-201 protein_coding Danio_rerio 8e-23 113
ENSDART00000125174 nr1i2-001 protein_coding Danio_rerio 8e-23 113

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