C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493763 RPL7L1-003 ENSG00000146223 9606 + 6:42879635-42889896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000493763
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000493763 8.762±0.00 10.377±0.00 3.016±0.00 6.515±0.23 7.744±1.15 5.983±1.87 4.468±2.87 7.706±2.43 6.212±1.67 4.628±2.07 4.320±1.29 8.339±2.34 9.440±0.70 4.435±1.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005840 IEA ribosome
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 763
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 675
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 647
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000002 60
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000006 58
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00008 55
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00008 55

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