C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (proline IMINO transporter), member 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493980 SLC6A20-005 ENSG00000163817 9606 - 3:45759980-45765770 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonENST00000493980
Transcript ID Breast Colon
ENST00000493980 0.988±0.00 0.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073G CIL_00073G_0001 CGP 3:45689056-45796535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171647 Slc6a20a-002 protein_coding Mus_musculus 0 523
ENSMUST00000040960 Slc6a20a-001 protein_coding Mus_musculus 0 523
ENSMUST00000168824 Slc6a20b-003 nonsense_mediated_decay Mus_musculus 0 479
ENSMUST00000171122 Slc6a20b-004 processed_transcript Mus_musculus 0 479
ENSMUST00000026273 Slc6a20b-001 protein_coding Mus_musculus 0 479
ENSMUST00000166800 Slc6a20b-002 retained_intron Mus_musculus 2.8026e-45 185

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