C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: raftlin family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494346 RFTN2-005 ENSG00000162944 9606 - 2:197571735-197618021 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000494346
Transcript ID Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000494346 0.282±0.00 5.870±0.13 1.706±0.00 1.122±0.00 1.481±0.00 1.306±0.00 0.244±0.00 1.847±0.15 2.223±1.29 4.335±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X7 CIL_0007X7_0001 VISTA 2:196975905-197591368
CIL_00042C CIL_00042C_0002 CGP 2:197515571-197676045
CIL_0002KG CIL_0002KG_0001 CGP 2:197568224-197708387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027121 Rftn2-001 protein_coding Mus_musculus 0 638
ENSMUST00000132055 Rftn2-002 nonsense_mediated_decay Mus_musculus 0 492

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