C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calpain 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494738 CAPN10-010 ENSG00000142330 9606 + 2:240589884-240599103 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyTestisENST00000494738
Transcript ID Heart Kidney Testis
ENST00000494738 0.247±0.00 0.074±0.00 1.780±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0003NU CIL_0003NU_0001 CGP 2:240565804-240617705
CIL_0003NA CIL_0003NA_0001 CGP 2:240586716-240631259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152983 Capn10-003 nonsense_mediated_decay Mus_musculus 0 654
ENSMUST00000027488 Capn10-001 protein_coding Mus_musculus 0 654

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