C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495585 PRRC2C-002 ENSG00000117523 9606 + 1:171541830-171593511 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000495585
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000495585 2.012±0.00 5.322±0.00 1.820±0.00 4.195±2.31 2.745±0.00 10.823±0.00 2.456±1.42 5.427±0.00 4.718±0.48 16.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0001 VISTA 1:170981906-171584837

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183223 Prrc2c-009 protein_coding Mus_musculus 0 3066
ENSMUST00000182593 Prrc2c-005 protein_coding Mus_musculus 0 2241
ENSMUST00000028016 Prrc2c-006 protein_coding Mus_musculus 0 1862
ENSMUST00000182660 Prrc2c-004 protein_coding Mus_musculus 0 1862
ENSMUST00000182149 Prrc2c-001 protein_coding Mus_musculus 0 1862
ENSMUST00000182393 Prrc2c-003 protein_coding Mus_musculus 0 1792
ENSMUST00000182535 Prrc2c-013 retained_intron Mus_musculus 0 254

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