C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rap guanine nucleotide exchange factor (GEF) 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000495953  |
RAPGEF3-013 |
ENSG00000079337 |
9606 | - |
12:47751170-47758183  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005YT | CIL_0005YT_0001 | CGP | 12:47709734-47771040 |
| CIL_0002OC | CIL_0002OC_0001 | CGP | 12:47734672-47782753 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0035556 | IEA | intracellular signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000177352
|
Rapgef3-007 | protein_coding | Mus_musculus | 0 | 568 |
|
ENSMUST00000146620
|
Rapgef3-008 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000123397
|
Rapgef3-004 | retained_intron | Mus_musculus | 0 | 536 |
|
ENSMUST00000128775
|
Rapgef3-003 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000129223
|
Rapgef3-001 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000126854
|
Rapgef3-005 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000149419
|
Rapgef3-009 | nonsense_mediated_decay | Mus_musculus | 0 | 534 |
|
ENSMUST00000142196
|
Rapgef3-011 | retained_intron | Mus_musculus | 0 | 346 |
|
ENSMUST00000153464
|
Rapgef3-010 | processed_transcript | Mus_musculus | 0 | 346 |
