C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496381 CDK5RAP1-002 ENSG00000101391 9606 - 20:33360351-33401478 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000496381
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000496381 4.554±0.00 6.583±0.00 2.045±0.00 3.268±1.07 1.915±0.00 2.594±1.91 4.346±0.15 2.017±0.00 2.048±0.00 3.557±0.00 7.738±4.12 4.586±0.00 6.273±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000521 CIL_000521_0001 CGP 20:33358839-33443892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028990 Cdk5rap1-201 protein_coding Mus_musculus 0 941
ENSMUST00000109731 Cdk5rap1-001 protein_coding Mus_musculus 0 941
ENSMUST00000152180 Cdk5rap1-006 retained_intron Mus_musculus 0 492
ENSMUST00000148289 Cdk5rap1-002 processed_transcript Mus_musculus 0 488

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