C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152180 Cdk5rap1-006 ENSMUSG00000027487 10090 - 2:154350522-154354344 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryENSMUST00000152180
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary
ENSMUST00000152180 1.597±0.35 2.116±0.62 1.894±0.26 1.725±0.17 2.018±0.17 1.635±0.04 2.194±0.37 2.214±0.04 3.164±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000521 CIL_000521_0002 CGP 2:154335380-154408099

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339269 CDK5RAP1-012 protein_coding Homo_sapiens 0 193
ENST00000346416 CDK5RAP1-010 protein_coding Homo_sapiens 0 593
ENST00000357886 CDK5RAP1-011 protein_coding Homo_sapiens 0 494
ENST00000461356 CDK5RAP1-015 processed_transcript Homo_sapiens 0 405
ENST00000471264 CDK5RAP1-006 processed_transcript Homo_sapiens 0 593
ENST00000473791 CDK5RAP1-008 retained_intron Homo_sapiens 0 302
ENST00000473997 CDK5RAP1-013 protein_coding Homo_sapiens 0 593
ENST00000477105 CDK5RAP1-016 processed_transcript Homo_sapiens 0 536
ENST00000481964 CDK5RAP1-001 processed_transcript Homo_sapiens 0 193
ENST00000488723 CDK5RAP1-004 processed_transcript Homo_sapiens 0 326
ENST00000496381 CDK5RAP1-002 processed_transcript Homo_sapiens 0 492
ENST00000498525 CDK5RAP1-009 processed_transcript Homo_sapiens 0 414

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