C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TSEN34 tRNA splicing endonuclease subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496583 TSEN34-002 ENSG00000170892 9606 + 19:54190343-54193666 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000496583
Transcript ID Ovary Placenta Testis
ENST00000496583 2.590±0.00 1.418±0.00 2.913±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M7 CIL_0005M7_0001 CGP 19:54173412-54194536
CIL_0005M6 CIL_0005M6_0001 CGP 19:54189938-54249003

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108627 Tsen34-004 protein_coding Mus_musculus 0 291
ENSMUST00000155060 Tsen34-009 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000137204 Tsen34-008 protein_coding Mus_musculus 0 281
ENSMUST00000142713 Tsen34-007 protein_coding Mus_musculus 0 281
ENSMUST00000108629 Tsen34-003 protein_coding Mus_musculus 0 281
ENSMUST00000038521 Tsen34-002 protein_coding Mus_musculus 0 281
ENSMUST00000108630 Tsen34-001 protein_coding Mus_musculus 0 281
ENSMUST00000123088 Tsen34-006 protein_coding Mus_musculus 0 279
ENSMUST00000142461 4930526A20Rik-002 processed_transcript Mus_musculus 0 268
ENSMUST00000134228 4930526A20Rik-001 transcribed_processed_pseudogene Mus_musculus 0 255

Loading