C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 72 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496809 VPS72-007 ENSG00000163159 9606 - 1:151176731-151190145 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000496809
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000496809 8.345±0.00 20.629±0.00 20.259±0.00 17.870±0.00 18.379±0.00 9.236±0.00 18.118±0.00 4.573±0.00 11.168±0.00 27.398±13.14 29.142±0.00 18.959±4.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UG CIL_0000UG_0002 CGP 1:151156664-151170297

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125548 Vps72-004 processed_transcript Mus_musculus 0 972
ENSMUST00000009102 Vps72-001 protein_coding Mus_musculus 0 950
ENSMUST00000173594 Gm18737-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000152333 Vps72-005 retained_intron Mus_musculus 0 499
ENSMUST00000139296 Vps72-002 processed_transcript Mus_musculus 0 379
ENSMUST00000136076 Vps72-003 processed_transcript Mus_musculus 0 213

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