C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine palmitoyltransferase, small subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497137 SPTSSB-003 ENSG00000196542 9606 - 3:161345775-161371501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungOvaryPlacentaTestisENST00000497137
Transcript ID Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000497137 0.122±0.00 0.254±0.00 0.600±0.00 1.770±0.00 0.200±0.00 0.297±0.00 0.222±0.00 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K1 CIL_0004K1_0002 CGP 3:161104696-161372880
CIL_00049N CIL_00049N_0002 CGP 3:161344792-161503942

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004758 IDA serine C-palmitoyltransferase activity
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0017059 IDA serine C-palmitoyltransferase complex
GO:0030148 TAS sphingolipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171529 Sptssb-202 protein_coding Mus_musculus 0 274
ENSMUST00000051239 Sptssb-201 protein_coding Mus_musculus 0 274

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