C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: natural killer cell triggering receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498730 NKTR-008 ENSG00000114857 9606 + 3:42627186-42637035 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungMuscleENST00000498730
Transcript ID Bladder Breast Colon Kidney Liver Lung Muscle
ENST00000498730 3.882±0.00 9.004±0.00 7.091±0.00 3.634±0.00 5.254±0.00 11.531±0.00 0.680±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0001 CGP 3:42489299-42601080
CIL_00047Z CIL_00047Z_0001 CGP 3:42547969-42601080
CIL_000488 CIL_000488_0001 CGP 3:42581840-42648741
CIL_000487 CIL_000487_0001 CGP 3:42600614-42665854

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035112 Nktr-001 protein_coding Mus_musculus 0 963
ENSMUST00000182179 Nktr-003 nonsense_mediated_decay Mus_musculus 0 959
ENSMUST00000182225 Nktr-006 protein_coding Mus_musculus 0 704
ENSMUST00000183070 Nktr-002 nonsense_mediated_decay Mus_musculus 2e-20 106
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0000005 62

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