C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502640 LDB2-004 ENSG00000169744 9606 - 4:16501546-16898634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000502640
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000502640 6.167±0.00 6.271±0.00 5.754±0.00 3.470±0.00 5.386±0.00 1.194±0.00 1.977±0.00 0.970±0.00 1.339±0.00 2.767±2.27 2.677±0.34 1.557±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033W CIL_00033W_0003 CGP 4:16160505-16898809
CIL_00033T CIL_00033T_0002 CGP 4:16501541-17512234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003712 IEA transcription cofactor activity
GO:0005634 IEA nucleus
GO:0030274 IEA LIM domain binding
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070748 Ldb2-201 protein_coding Mus_musculus 0 1439

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