| Transcript ID | Adipose | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENST00000503974 | 7.921±0.00 | 5.959±0.00 | 5.588±0.00 | 4.310±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ and LIM domain 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000503974  |
PDLIM5-005 |
ENSG00000163110 |
9606 | + |
4:94451935-94666552  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091X | CIL_00091X_0001 | VISTA | 4:94368294-94970308 |
| CIL_0001S9 | CIL_0001S9_0002 | CGP | 4:94451857-95158448 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | ISS | actin binding |
| GO:0005080 | ISS | protein kinase C binding |
| GO:0005515 | IEA | protein binding |
| GO:0005829 | ISS | cytosol |
| GO:0008270 | IEA | zinc ion binding |
| GO:0014069 | ISS | postsynaptic density |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0016020 | ISS | membrane |
| GO:0030054 | IEA | cell junction |
| GO:0042805 | ISS | actinin binding |
| GO:0043005 | IEA | neuron projection |
| GO:0045211 | IEA | postsynaptic membrane |
| GO:0051963 | ISS | regulation of synapse assembly |
| GO:0061001 | ISS | regulation of dendritic spine morphogenesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029941
|
Pdlim5-201 | protein_coding | Mus_musculus | 0 | 1002 |
|
ENSMUST00000058626
|
Pdlim5-202 | protein_coding | Mus_musculus | 0 | 741 |
|
ENSMUST00000170361
|
Pdlim5-205 | protein_coding | Mus_musculus | 0 | 719 |
|
ENSMUST00000090134
|
Pdlim5-203 | protein_coding | Mus_musculus | 0 | 390 |
|
ENSMUST00000168967
|
Pdlim5-204 | protein_coding | Mus_musculus | 0 | 390 |
