C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053382-ENSDARG00000035535 CGP 7955 5:48696789-49751679
GeneTranscriptPositionBiotype
ENSDARG00000007657 (ccnh)
cyclin H 		ENSDART00000007057 (ccnh-201) 49746733-49758231 protein_coding
ENSDART00000145665 (ccnh-001) 49746731-49758231 protein_coding
ENSDARG00000035535 (rasa1a)
RAS p21 protein activator 1a 		ENSDART00000051518 (rasa1a-201) 49646058-49751679 protein_coding
ENSDART00000139824 (rasa1a-001) 49645427-49743469 protein_coding
ENSDART00000149316 (rasa1a-002) 49665110-49700903 protein_coding
ENSDART00000149716 (rasa1a-003) 49728665-49732803 retained_intron
ENSDARG00000053382 (cox7c)
cytochrome c oxidase, subunit VIIc 		ENSDART00000075413 (cox7c-001) 48696789-48698411 protein_coding
ENSDARG00000092700 (si:dkey-56m20.2)
si:dkey-56m20.2 		ENSDART00000133999 (si:dkey-56m20.2-001) 48800242-48801044 processed_transcript
CIL_0005TN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127184-ENSG00000145715 CGP 9606 5:86617904-87391931
GeneTranscriptPositionBiotype
ENSG00000127184 (COX7C)
cytochrome c oxidase subunit VIIc 		ENST00000247655 (COX7C-001) 86617904-86620962 protein_coding
ENST00000505430 (COX7C-004) 86617941-86620766 processed_transcript
ENST00000509578 (COX7C-002) 86617956-86620761 protein_coding
ENST00000510447 (COX7C-003) 86618175-86620948 processed_transcript
ENST00000511472 (COX7C-005) 86617928-86620766 processed_transcript
ENST00000513124 (COX7C-007) 86617986-86620766 processed_transcript
ENST00000515763 (COX7C-006) 86617973-86620766 protein_coding
ENSG00000134480 (CCNH)
cyclin H 		ENST00000256897 (CCNH-001) 87394265-87413019 protein_coding
ENST00000504115 (CCNH-008) 87394326-87408186 retained_intron
ENST00000504878 (CCNH-002) 87394274-87412904 protein_coding
ENST00000505230 (CCNH-005) 87409073-87412850 retained_intron
ENST00000505587 (CCNH-004) 87391494-87408180 retained_intron
ENST00000508855 (CCNH-003) 87393417-87411294 protein_coding
ENST00000510020 (CCNH-006) 87408038-87412871 processed_transcript
ENST00000510921 (CCNH-010) 87392707-87404950 processed_transcript
ENST00000511207 (CCNH-009) 87394280-87401774 retained_intron
ENST00000513499 (CCNH-007) 87404842-87412889 processed_transcript
ENSG00000145715 (RASA1)
RAS p21 protein activator (GTPase activating protein) 1 		ENST00000274376 (RASA1-001) 87267888-87390927 protein_coding
ENST00000456692 (RASA1-002) 87268933-87391931 protein_coding
ENST00000506290 (RASA1-003) 87268944-87391129 protein_coding
ENST00000509953 (RASA1-007) 87337972-87369901 retained_intron
ENST00000512763 (RASA1-004) 87268944-87391099 protein_coding
ENST00000515800 (RASA1-005) 87267888-87391919 nonsense_mediated_decay
ENSG00000207452 (RNU6-606P)
RNA, U6 small nuclear 606, pseudogene 		ENST00000384721 (RNU6-606P-201) 87299687-87299797 snRNA
ENSG00000233828 (CTC-242N15.1)
 ENST00000445770 (CTC-242N15.1-002) 87216606-87239790 lincRNA
ENST00000611331 (CTC-242N15.1-001) 87205408-87240145 lincRNA
ENSG00000241243 (RN7SL629P)
RNA, 7SL, cytoplasmic 629, pseudogene 		ENST00000489622 (RN7SL629P-201) 87294189-87294473 misc_RNA
ENSG00000242477 (CTD-2161E19.1)
 ENST00000486625 (CTD-2161E19.1-001) 86884231-86884881 processed_pseudogene
ENSG00000249061 (RP11-72L22.1)
 ENST00000503349 (RP11-72L22.1-001) 86967321-87137712 lincRNA
ENST00000515750 (RP11-72L22.1-002) 87120148-87137698 lincRNA
ENSG00000250544 (CTC-493L21.1)
 ENST00000503843 (CTC-493L21.1-002) 86746931-86749578 lincRNA
ENST00000506471 (CTC-493L21.1-001) 86746818-86749772 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TN_0001ENSDARG00000007657ENSDART00000007057ENSDART00000145665ENSDARG00000035535ENSDART00000051518ENSDART00000139824ENSDART00000149316ENSDART00000149716ENSDARG00000053382ENSDART00000075413ENSDARG00000092700ENSDART00000133999CIL_0005TN_0002ENSG00000127184ENST00000247655ENST00000505430ENST00000509578ENST00000510447ENST00000511472ENST00000513124ENST00000515763ENSG00000134480ENST00000256897ENST00000504115ENST00000504878ENST00000505230ENST00000505587ENST00000508855ENST00000510020ENST00000510921ENST00000511207ENST00000513499ENSG00000145715ENST00000274376ENST00000456692ENST00000506290ENST00000509953ENST00000512763ENST00000515800ENSG00000207452ENST00000384721ENSG00000233828ENST00000445770ENST00000611331ENSG00000241243ENST00000489622ENSG00000242477ENST00000486625ENSG00000249061ENST00000503349ENST00000515750ENSG00000250544ENST00000503843ENST00000506471
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TN_0001ENSDARG00000007657ENSDART00000007057ENSDART00000145665ENSDARG00000035535ENSDART00000051518ENSDART00000139824ENSDARG00000053382ENSDART00000075413ENSDARG00000092700ENSDART00000133999CIL_0005TN_0002ENSG00000127184ENST00000247655ENST00000511472ENST00000515763ENSG00000134480ENST00000256897ENST00000504115ENST00000504878ENST00000505587ENST00000508855ENST00000510921ENST00000513499ENSG00000145715ENST00000274376ENST00000456692ENST00000512763ENST00000515800ENSG00000207452ENST00000384721ENSG00000233828ENST00000445770ENST00000611331ENSG00000241243ENST00000489622ENSG00000242477ENST00000486625ENSG00000249061ENST00000503349ENST00000515750ENSG00000250544ENST00000503843ENST00000506471
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007657 ENSDART00000007057 N/A N/A N/A 8.836±4.95 N/A N/A 4.582±0.37 4.112±2.36 0.338±0.00 N/A 1.339±0.00 N/A N/A N/A
ENSDART00000145665 N/A N/A N/A N/A N/A N/A 0.540±0.00 11.816±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000035535 ENSDART00000051518 N/A N/A N/A 2.506±0.11 N/A N/A 0.893±0.00 N/A 0.124±0.00 N/A N/A N/A N/A N/A
ENSDART00000139824 N/A N/A N/A 1.737±0.38 N/A N/A 3.036±0.67 5.616±2.88 0.891±0.00 N/A 2.172±0.00 N/A N/A N/A
ENSDART00000149316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000053382 ENSDART00000075413 N/A N/A N/A 215.064±203.51 N/A N/A 920.894±180.11 112.524±107.06 21.187±0.00 N/A 475.388±0.00 N/A N/A N/A
ENSDARG00000092700 ENSDART00000133999 N/A N/A N/A N/A N/A N/A 0.184±0.09 0.918±0.00 0.231±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127184 ENST00000247655 N/A N/A 24.472±0.00 147.622±0.00 34.555±0.00 64.615±0.00 117.236±0.00 51.497±0.00 46.765±0.00 32.665±0.00 171.167±0.00 105.602±79.26 72.388±8.13 N/A
ENST00000505430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511472 152.595±0.00 206.766±0.00 28.792±0.00 121.098±30.68 98.169±63.83 155.428±99.60 346.380±0.00 117.435±60.96 82.551±39.94 77.994±56.43 143.729±12.35 109.905±75.17 75.417±19.85 139.157±87.44
ENST00000513124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515763 90.039±0.00 173.249±0.00 N/A 220.574±0.00 145.896±0.00 227.791±0.00 446.201±0.00 260.687±0.00 192.572±0.00 220.382±0.00 224.123±0.00 197.781±51.09 148.925±29.03 155.541±36.54
ENSG00000134480 ENST00000256897 10.911±0.00 N/A N/A 15.647±3.53 11.415±0.38 8.138±0.00 5.134±0.00 7.661±0.00 6.052±2.97 9.255±0.00 4.225±0.00 8.259±0.00 N/A 28.498±0.00
ENST00000504115 N/A N/A N/A N/A N/A N/A N/A N/A 6.992±0.00 17.178±0.00 6.638±0.00 8.845±0.00 N/A 32.766±0.00
ENST00000504878 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.727±0.00 N/A N/A N/A N/A
ENST00000505230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505587 4.801±0.00 9.025±0.00 5.955±0.00 6.533±0.00 5.949±0.00 4.268±0.08 3.329±1.06 5.613±0.00 6.413±0.00 7.582±0.00 N/A 5.974±0.00 12.797±3.52 N/A
ENST00000508855 N/A N/A N/A N/A N/A 3.004±0.00 N/A N/A N/A 5.365±0.00 N/A 7.741±0.00 N/A N/A
ENST00000510020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.207±0.00
ENST00000511207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513499 N/A N/A N/A N/A N/A N/A N/A N/A 8.729±0.00 N/A 8.863±0.00 N/A N/A N/A
ENSG00000145715 ENST00000274376 N/A N/A 2.727±0.00 6.177±0.00 N/A 3.039±0.00 N/A 3.619±0.00 4.447±0.00 3.307±0.00 N/A 2.749±0.07 N/A N/A
ENST00000456692 N/A N/A N/A 4.771±0.00 3.278±0.00 N/A N/A 4.381±0.00 1.308±0.00 3.903±0.00 1.132±0.15 3.859±0.94 12.470±4.96 N/A
ENST00000506290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512763 N/A N/A N/A N/A N/A N/A N/A 1.235±0.00 N/A N/A N/A N/A N/A N/A
ENST00000515800 N/A N/A N/A N/A N/A N/A N/A N/A 2.650±0.00 2.389±0.00 N/A 1.977±0.00 N/A N/A
ENSG00000207452 ENST00000384721 N/A 0.457±0.00 N/A 0.876±0.00 N/A N/A 33.816±0.00 N/A N/A N/A N/A 60.331±0.00 N/A N/A
ENSG00000233828 ENST00000445770 0.224±0.00 0.692±0.00 0.032±0.00 0.281±0.24 0.299±0.09 0.170±0.00 0.177±0.10 0.263±0.17 0.057±0.04 0.208±0.00 0.076±0.00 0.107±0.01 N/A 0.420±0.00
ENST00000611331 N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A 0.107±0.00 N/A N/A 0.269±0.00 N/A
ENSG00000241243 ENST00000489622 0.053±0.00 0.056±0.00 N/A N/A 0.057±0.00 0.052±0.00 0.367±0.00 N/A N/A N/A N/A N/A N/A 0.367±0.00
ENSG00000242477 ENST00000486625 N/A 0.136±0.00 N/A 0.057±0.00 0.047±0.02 0.303±0.12 0.024±0.00 0.239±0.21 0.073±0.00 0.220±0.18 0.212±0.00 0.253±0.08 0.084±0.01 0.024±0.00
ENSG00000249061 ENST00000503349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.050±0.00
ENST00000515750 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250544 ENST00000503843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.21
ENST00000506471 N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.16

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