C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069105-ENSDARG00000060705 CGP 7955 21:36509363-36723598
GeneTranscriptPositionBiotype
ENSDARG00000060705 (nsd1b)
nuclear receptor binding SET domain protein 1b 		ENSDART00000085822 (nsd1b-002) 36714113-36714668 retained_intron
ENSDART00000131188 (nsd1b-201) 36681526-36723598 protein_coding
ENSDART00000137883 (nsd1b-003) 36679056-36681876 protein_coding
ENSDART00000143621 (nsd1b-001) 36679035-36723598 protein_coding
ENSDARG00000069105 (fgfr4)
fibroblast growth factor receptor 4 		ENSDART00000100286 (fgfr4-001) 36509363-36520156 protein_coding
CIL_0000OQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160867-ENSG00000165671 CGP 9606 5:177086886-177300215
GeneTranscriptPositionBiotype
ENSG00000160867 (FGFR4)
fibroblast growth factor receptor 4 		ENST00000292408 (FGFR4-001) 177086886-177098144 protein_coding
ENST00000393637 (FGFR4-002) 177089567-177097769 protein_coding
ENST00000393648 (FGFR4-003) 177086905-177098022 protein_coding
ENST00000426612 (FGFR4-006) 177089598-177091096 retained_intron
ENST00000430285 (FGFR4-005) 177089576-177091104 nonsense_mediated_decay
ENST00000483872 (FGFR4-015) 177094825-177095579 retained_intron
ENST00000502906 (FGFR4-004) 177086914-177097732 protein_coding
ENST00000503708 (FGFR4-010) 177086905-177091104 protein_coding
ENST00000507708 (FGFR4-011) 177086916-177090563 processed_transcript
ENST00000508139 (FGFR4-013) 177091778-177093496 retained_intron
ENST00000509511 (FGFR4-007) 177089603-177093068 retained_intron
ENST00000510911 (FGFR4-009) 177086916-177090560 protein_coding
ENST00000511076 (FGFR4-014) 177093175-177096179 protein_coding
ENST00000513166 (FGFR4-008) 177087419-177090622 protein_coding
ENST00000513423 (FGFR4-016) 177097191-177097764 retained_intron
ENST00000514472 (FGFR4-012) 177086914-177090641 protein_coding
ENSG00000165671 (NSD1)
nuclear receptor binding SET domain protein 1 		ENST00000347982 (NSD1-002) 177134229-177295762 protein_coding
ENST00000354179 (NSD1-201) 177133079-177300210 protein_coding
ENST00000375350 (NSD1-007) 177212111-177239865 nonsense_mediated_decay
ENST00000439151 (NSD1-001) 177133925-177300215 protein_coding
ENST00000503056 (NSD1-009) 177265727-177280583 protein_coding
ENST00000504457 (NSD1-010) 177266337-177269684 protein_coding
ENST00000505395 (NSD1-011) 177266380-177269671 protein_coding
ENST00000508029 (NSD1-008) 177265465-177269758 protein_coding
ENST00000508896 (NSD1-004) 177133600-177209672 protein_coding
ENST00000510954 (NSD1-005) 177133079-177204236 protein_coding
ENST00000511258 (NSD1-003) 177134173-177137404 protein_coding
ENST00000512992 (NSD1-006) 177133025-177135426 retained_intron
ENST00000513736 (NSD1-013) 177288526-177292127 retained_intron
ENST00000515735 (NSD1-012) 177266587-177273678 protein_coding
ENST00000602285 (NSD1-014) 177133798-177136345 retained_intron
ENSG00000240729 (CTD-2301A4.3)
 ENST00000460608 (CTD-2301A4.3-001) 177264766-177265241 processed_pseudogene
CIL_0000OQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005320-ENSMUSG00000021488 CGP 10090 13:55152640-55318325
GeneTranscriptPositionBiotype
ENSMUSG00000005320 (Fgfr4)
fibroblast growth factor receptor 4 		ENSMUST00000005452 (Fgfr4-001) 55152640-55168759 protein_coding
ENSMUST00000162167 (Fgfr4-003) 55156117-55156904 retained_intron
ENSMUST00000162967 (Fgfr4-002) 55155683-55156655 processed_transcript
ENSMUSG00000021488 (Nsd1)
nuclear receptor-binding SET-domain protein 1 		ENSMUST00000099490 (Nsd1-201) 55209782-55318325 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OQ_0001ENSDARG00000060705ENSDART00000085822ENSDART00000131188ENSDART00000137883ENSDART00000143621ENSDARG00000069105ENSDART00000100286CIL_0000OQ_0002ENSG00000160867ENST00000292408ENST00000393637ENST00000393648ENST00000426612ENST00000430285ENST00000483872ENST00000502906ENST00000503708ENST00000507708ENST00000508139ENST00000509511ENST00000510911ENST00000511076ENST00000513166ENST00000513423ENST00000514472ENSG00000165671ENST00000347982ENST00000354179ENST00000375350ENST00000439151ENST00000503056ENST00000504457ENST00000505395ENST00000508029ENST00000508896ENST00000510954ENST00000511258ENST00000512992ENST00000513736ENST00000515735ENST00000602285ENSG00000240729ENST00000460608CIL_0000OQ_0003ENSMUSG00000005320ENSMUST00000005452ENSMUST00000162167ENSMUST00000162967ENSMUSG00000021488ENSMUST00000099490
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OQ_0001ENSDARG00000060705ENSDART00000085822ENSDART00000131188ENSDART00000143621ENSDARG00000069105ENSDART00000100286CIL_0000OQ_0002ENSG00000160867ENST00000292408ENST00000393637ENST00000393648ENST00000426612ENST00000430285ENST00000483872ENST00000502906ENST00000503708ENST00000508139ENST00000510911ENST00000511076ENST00000513423ENST00000514472ENSG00000165671ENST00000347982ENST00000354179ENST00000439151ENSG00000240729ENST00000460608CIL_0000OQ_0003ENSMUSG00000005320ENSMUST00000005452ENSMUST00000162167ENSMUST00000162967ENSMUSG00000021488ENSMUST00000099490
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060705 ENSDART00000085822 N/A N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A
ENSDART00000131188 N/A N/A N/A 1.778±0.00 N/A N/A 0.356±0.00 N/A 0.008±0.00 N/A 0.154±0.00 N/A N/A N/A
ENSDART00000137883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143621 N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069105 ENSDART00000100286 N/A N/A N/A 1.158±0.29 N/A N/A 3.604±2.15 1.939±0.79 0.665±0.00 N/A 0.688±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160867 ENST00000292408 0.044±0.00 N/A N/A N/A N/A 0.772±0.00 N/A 15.067±0.00 14.656±0.00 34.809±0.00 N/A 10.051±5.22 0.857±0.47 0.763±0.00
ENST00000393637 N/A N/A N/A N/A 0.058±0.00 N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000393648 N/A N/A N/A 0.055±0.00 0.305±0.00 N/A 0.090±0.00 3.778±0.00 3.053±0.00 N/A 0.123±0.00 4.617±0.00 0.603±0.16 1.086±0.00
ENST00000426612 N/A N/A 1.652±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430285 N/A N/A 1.168±0.00 N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A
ENST00000483872 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A
ENST00000502906 N/A 0.406±0.00 N/A N/A N/A N/A N/A 1.979±0.00 N/A 0.366±0.00 N/A 7.213±0.00 0.887±0.09 N/A
ENST00000503708 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.121±0.00 N/A 0.825±0.00 N/A N/A
ENST00000507708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508139 N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000509511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510911 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.412±0.00
ENST00000511076 0.152±0.00 N/A N/A 0.239±0.00 0.455±0.00 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A
ENST00000513166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.661±0.00 N/A N/A N/A
ENST00000514472 N/A N/A N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A
ENSG00000165671 ENST00000347982 2.841±0.00 3.455±0.00 1.018±0.00 1.360±0.21 3.387±0.69 2.505±0.00 0.968±0.32 2.297±0.25 1.255±0.00 2.319±0.00 2.899±1.33 2.576±1.39 1.582±0.18 5.600±0.89
ENST00000354179 N/A N/A 1.293±0.00 N/A N/A 1.711±0.00 1.769±0.00 N/A N/A N/A 0.424±0.00 N/A N/A N/A
ENST00000375350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439151 0.386±0.00 N/A N/A 1.146±0.00 1.285±0.00 0.584±0.00 0.768±0.04 1.205±0.00 1.746±0.00 2.059±0.00 N/A 1.047±0.00 0.999±0.48 N/A
ENST00000503056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240729 ENST00000460608 0.103±0.00 0.643±0.00 0.515±0.00 0.155±0.10 0.714±0.66 0.024±0.00 0.137±0.04 0.642±0.62 0.433±0.36 0.199±0.10 0.096±0.00 0.159±0.03 N/A 0.201±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005320 ENSMUST00000005452 0.064±0.07 4.781±1.70 0.030±0.00 0.206±0.18 0.239±0.01 7.016±1.27 0.067±0.01 9.722±3.66 6.552±4.25 14.984±3.01 0.355±0.11 1.019±0.35 3.118±2.18 0.210±0.07
ENSMUST00000162167 0.160±0.10 N/A 0.187±0.00 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.547±0.00 N/A
ENSMUSG00000021488 ENSMUST00000099490 6.286±4.26 2.933±1.29 8.755±0.20 9.626±2.92 4.173±1.91 1.831±0.34 2.329±1.28 3.830±2.27 4.379±2.10 4.144±2.02 2.468±1.63 5.887±4.77 11.967±0.99 1.204±0.66

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