C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048274 Ttc39b-002 ENSMUSG00000038172 10090 - 4:83239810-83324239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryPlacentaTestisENSMUST00000048274
Transcript ID Breast Colon Liver Ovary Placenta Testis
ENSMUST00000048274 1.810±0.00 2.126±0.00 0.406±0.00 1.439±0.00 0.295±0.08 1.268±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014A CIL_00014A_0002 CGP 4:82897920-83324255
CIL_000147 CIL_000147_0002 CGP 4:83220300-83467676

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297615 TTC39B-201 protein_coding Homo_sapiens 0 1236
ENST00000380850 TTC39B-202 protein_coding Homo_sapiens 0 1038
ENST00000380853 TTC39B-003 retained_intron Homo_sapiens 0 207
ENST00000505732 TTC39B-006 retained_intron Homo_sapiens 0 1367
ENST00000507285 TTC39B-007 protein_coding Homo_sapiens 0 1345
ENST00000507993 TTC39B-005 protein_coding Homo_sapiens 0 1345
ENST00000512701 TTC39B-001 protein_coding Homo_sapiens 0 1445

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