C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | H2A histone family, member Y | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000506671  |
H2AFY-006 |
ENSG00000113648 |
9606 | - |
5:135334473-135399238  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00083J | CIL_00083J_0001 | VISTA | 5:135133909-135736454 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000786 | IEA | nucleosome |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0046982 | IEA | protein heterodimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000045788
|
H2afy-002 | protein_coding | Mus_musculus | 0 | 719 |
|
ENSMUST00000016081
|
H2afy-001 | protein_coding | Mus_musculus | 0 | 719 |
|
ENSMUST00000139511
|
H2afy-003 | processed_transcript | Mus_musculus | 0 | 643 |
|
ENSMUST00000141031
|
H2afy-004 | retained_intron | Mus_musculus | 0 | 610 |
|
ENSMUST00000137835
|
H2afy-008 | retained_intron | Mus_musculus | 0 | 582 |
|
ENSMUST00000154778
|
H2afy-005 | processed_transcript | Mus_musculus | 0 | 453 |
|
ENSMUST00000154564
|
H2afy-006 | processed_transcript | Mus_musculus | 0 | 433 |
|
ENSMUST00000141589
|
H2afy-007 | retained_intron | Mus_musculus | 0 | 399 |
