C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMAD family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507637 SMAD5-010 ENSG00000113658 9606 + 5:136160986-136172829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000507637
Transcript ID Muscle
ENST00000507637 2.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P2 CIL_0005P2_0001 CGP 5:136028895-136188747
CIL_0005P3 CIL_0005P3_0001 CGP 5:136132845-136365537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138677 Smad5-004 processed_transcript Mus_musculus 0 689
ENSMUST00000109874 Smad5-003 protein_coding Mus_musculus 0 667
ENSMUST00000109876 Smad5-002 protein_coding Mus_musculus 0 667
ENSMUST00000069557 Smad5-001 protein_coding Mus_musculus 0 667
ENSMUST00000132302 Smad5-005 processed_transcript Mus_musculus 0 366

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