C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509889 COPG1-008 ENSG00000181789 9606 + 3:129265752-129277457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000509889
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000509889 30.696±0.00 5.009±0.00 26.241±12.31 28.889±4.76 20.052±0.00 5.627±0.00 26.471±14.00 24.730±16.78 5.341±0.00 47.380±40.68 120.216±0.00 50.234±20.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000312 CIL_000312_0001 CGP 3:129169484-129277773
CIL_00030Z CIL_00030Z_0001 CGP 3:129249606-129306186

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 IEA COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113607 Copg1-001 protein_coding Mus_musculus 0 719
ENSMUST00000149907 Copg1-004 retained_intron Mus_musculus 0 507
ENSMUST00000127614 Copg1-008 processed_transcript Mus_musculus 0 220

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