C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000312_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169714-ENSG00000181789 CGP 9606 3:129169484-129277773
GeneTranscriptPositionBiotype
ENSG00000169714 (CNBP)
CCHC-type zinc finger, nucleic acid binding protein 		ENST00000422453 (CNBP-001) 129169484-129183922 protein_coding
ENST00000441626 (CNBP-009) 129170102-129183910 protein_coding
ENST00000446936 (CNBP-011) 129169487-129183899 protein_coding
ENST00000451728 (CNBP-010) 129169487-129183899 protein_coding
ENST00000500450 (CNBP-004) 129169569-129183910 protein_coding
ENST00000502372 (CNBP-006) 129170232-129183864 retained_intron
ENST00000502976 (CNBP-002) 129169484-129183905 protein_coding
ENST00000504813 (CNBP-003) 129169569-129183922 protein_coding
ENST00000507573 (CNBP-005) 129171252-129183896 retained_intron
ENST00000512338 (CNBP-008) 129171168-129183922 protein_coding
ENSG00000181789 (COPG1)
coatomer protein complex, subunit gamma 1 		ENST00000314797 (COPG1-001) 129249606-129277773 protein_coding
ENST00000504350 (COPG1-005) 129249653-129255040 nonsense_mediated_decay
ENST00000504547 (COPG1-015) 129260227-129265675 retained_intron
ENST00000509208 (COPG1-014) 129254327-129255039 retained_intron
ENST00000509889 (COPG1-008) 129265752-129277457 protein_coding
ENST00000512034 (COPG1-013) 129272853-129275183 retained_intron
ENST00000513410 (COPG1-009) 129263911-129267235 retained_intron
ENST00000513965 (COPG1-004) 129249627-129253098 retained_intron
ENST00000514478 (COPG1-006) 129272296-129277498 nonsense_mediated_decay
ENST00000515725 (COPG1-002) 129249632-129277771 retained_intron
ENSG00000241673 (RPS27P12)
ribosomal protein S27 pseudogene 12 		ENST00000464146 (RPS27P12-001) 129218093-129218350 processed_pseudogene
ENSG00000278658 (MIR6826)
microRNA 6826 		ENST00000617808 (MIR6826-201) 129272146-129272243 miRNA
CIL_000312_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030057-ENSMUSG00000030058 CGP 10090 6:87842615-87913595
GeneTranscriptPositionBiotype
ENSMUSG00000030057 (Cnbp)
cellular nucleic acid binding protein 		ENSMUST00000032138 (Cnbp-201) 87842615-87851106 protein_coding
ENSMUST00000113617 (Cnbp-002) 87845098-87851060 protein_coding
ENSMUST00000113619 (Cnbp-001) 87843082-87851106 protein_coding
ENSMUST00000134851 (Cnbp-003) 87844000-87850994 retained_intron
ENSMUST00000141961 (Cnbp-004) 87843919-87851027 retained_intron
ENSMUSG00000030058 (Copg1)
coatomer protein complex, subunit gamma 1 		ENSMUST00000049966 (Copg1-003) 87887928-87890759 protein_coding
ENSMUST00000113607 (Copg1-001) 87887814-87913595 protein_coding
ENSMUST00000127614 (Copg1-008) 87908772-87910054 processed_transcript
ENSMUST00000132938 (Copg1-007) 87897803-87902766 retained_intron
ENSMUST00000137717 (Copg1-002) 87887957-87894962 retained_intron
ENSMUST00000149409 (Copg1-006) 87895456-87904867 retained_intron
ENSMUST00000149907 (Copg1-004) 87896006-87912530 retained_intron
ENSMUST00000152175 (Copg1-005) 87895116-87896102 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000312_0001ENSG00000169714ENST00000422453ENST00000441626ENST00000446936ENST00000451728ENST00000500450ENST00000502372ENST00000502976ENST00000504813ENST00000507573ENST00000512338ENSG00000181789ENST00000314797ENST00000504350ENST00000504547ENST00000509208ENST00000509889ENST00000512034ENST00000513410ENST00000513965ENST00000514478ENST00000515725ENSG00000241673ENST00000464146ENSG00000278658ENST00000617808CIL_000312_0002ENSMUSG00000030057ENSMUST00000032138ENSMUST00000113617ENSMUST00000113619ENSMUST00000134851ENSMUST00000141961ENSMUSG00000030058ENSMUST00000049966ENSMUST00000113607ENSMUST00000127614ENSMUST00000132938ENSMUST00000137717ENSMUST00000149409ENSMUST00000149907ENSMUST00000152175
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000312_0001ENSG00000169714ENST00000422453ENST00000441626ENST00000451728ENST00000500450ENST00000502372ENST00000502976ENST00000504813ENSG00000181789ENST00000314797ENST00000504547ENST00000509889ENSG00000241673ENST00000464146ENSG00000278658ENST00000617808CIL_000312_0002ENSMUSG00000030057ENSMUST00000032138ENSMUST00000113617ENSMUST00000113619ENSMUST00000141961ENSMUSG00000030058ENSMUST00000049966ENSMUST00000113607ENSMUST00000149409
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169714 ENST00000422453 N/A N/A 7.922±0.00 18.242±0.00 18.046±1.78 16.628±0.00 20.419±0.00 32.047±0.00 36.689±0.00 19.481±0.00 67.115±0.00 41.161±22.99 29.736±0.00 N/A
ENST00000441626 N/A N/A N/A N/A N/A N/A 55.919±0.00 N/A N/A 84.626±0.00 87.673±0.00 N/A N/A N/A
ENST00000446936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451728 56.798±0.00 63.159±0.00 3.816±0.00 23.684±14.28 29.733±14.37 31.680±22.62 25.459±18.39 13.923±5.14 17.970±7.97 60.158±0.00 86.695±0.00 32.531±14.81 23.359±1.29 55.357±0.00
ENST00000500450 N/A N/A N/A N/A N/A 71.328±0.00 69.835±0.00 54.444±0.00 20.433±0.00 102.979±0.00 125.284±0.00 N/A N/A 37.390±0.00
ENST00000502372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.468±0.00
ENST00000502976 87.162±0.00 90.686±0.00 12.983±0.00 52.583±22.30 33.279±11.64 46.273±27.38 33.506±18.83 27.802±5.50 24.535±11.09 45.950±22.92 70.304±31.56 50.079±13.64 40.517±10.99 54.732±23.32
ENST00000504813 N/A 26.141±0.00 N/A 23.293±0.00 18.376±0.00 N/A N/A N/A 14.784±0.00 N/A N/A 38.916±0.00 48.586±0.00 26.091±0.00
ENST00000507573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181789 ENST00000314797 46.742±0.00 29.711±0.00 6.064±0.00 23.797±10.36 28.782±15.78 14.573±5.24 13.502±7.54 29.801±23.10 23.597±17.14 21.273±11.11 26.484±20.68 29.951±18.04 45.644±16.11 18.018±0.80
ENST00000504350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.184±0.00
ENST00000509208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509889 N/A 30.696±0.00 5.009±0.00 26.241±12.31 28.889±4.76 20.052±0.00 5.627±0.00 26.471±14.00 24.730±16.78 N/A 5.341±0.00 47.380±40.68 120.216±0.00 50.234±20.88
ENST00000512034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241673 ENST00000464146 N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000278658 ENST00000617808 N/A 1.824±0.00 N/A 1.015±0.00 N/A N/A 0.567±0.00 N/A N/A N/A N/A N/A N/A 0.545±0.26
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030057 ENSMUST00000032138 20.000±1.56 16.122±0.20 18.954±0.00 8.851±0.00 N/A 10.590±0.40 12.014±0.00 10.827±1.00 14.923±4.01 15.422±1.71 N/A 20.852±8.19 14.394±5.59 10.232±3.23
ENSMUST00000113617 N/A 13.321±0.26 N/A 78.742±0.00 N/A N/A N/A N/A N/A N/A N/A 76.045±45.68 87.886±26.58 27.868±0.00
ENSMUST00000113619 58.724±4.69 28.077±6.01 94.045±25.42 60.276±14.93 46.638±5.41 34.049±6.77 57.876±15.36 44.675±11.42 84.916±41.90 55.879±3.74 194.037±63.88 74.821±29.67 135.373±45.31 23.989±6.23
ENSMUST00000134851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141961 43.601±3.83 25.676±1.70 N/A 26.223±0.00 35.626±10.14 27.970±8.26 31.807±0.45 44.579±2.89 26.722±5.37 36.739±4.41 N/A N/A N/A 7.338±0.00
ENSMUSG00000030058 ENSMUST00000049966 N/A N/A N/A 20.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113607 28.638±11.33 18.980±6.00 18.038±5.68 19.242±6.56 10.333±2.90 26.382±3.27 9.751±1.31 13.648±0.75 12.857±3.55 22.222±1.35 9.554±0.57 21.978±10.41 39.421±15.96 6.719±1.90
ENSMUST00000127614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149409 N/A N/A N/A 56.957±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 47.241±18.80 N/A
ENSMUST00000149907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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