C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: centromere protein U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510146 CENPU-003 ENSG00000151725 9606 - 4:184695002-184734130 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000510146
Transcript ID Ovary Placenta Testis
ENST00000510146 4.141±0.00 1.323±0.49 30.568±14.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0001 VISTA 4:184147184-184748475

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005815 IDA microtubule organizing center

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136724 Cenpu-007 retained_intron Mus_musculus 0 261
ENSMUST00000135432 Cenpu-003 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000034045 Cenpu-001 protein_coding Mus_musculus 0 261
ENSMUST00000093518 Cenpu-002 protein_coding Mus_musculus 0 259
ENSMUST00000136335 Primpol-003 retained_intron Mus_musculus 3e-35 154
ENSMUST00000040468 Primpol-001 protein_coding Mus_musculus 3e-35 154

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