C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510372 SNX2-002 ENSG00000205302 9606 + 5:122795536-122829671 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000510372
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000510372 8.860±0.00 11.202±0.00 2.727±1.20 10.108±0.00 10.018±0.00 5.508±0.00 8.458±0.00 3.080±0.00 7.220±1.28 8.740±0.00 4.187±1.46 11.658±7.09 12.553±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KK CIL_0005KK_0002 CGP 5:122311354-122830108
CIL_0004B0 CIL_0004B0_0001 CGP 5:122774996-123029354

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037850 Snx2-201 protein_coding Mus_musculus 0 1917
ENSMUST00000120410 Gm12543-001 transcribed_processed_pseudogene Mus_musculus 0 804
ENSMUST00000123665 Snx30-004 processed_transcript Mus_musculus 0 370

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