C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prohibitin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511832 PHB-201 ENSG00000167085 9606 - 17:49404049-49414905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000511832
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000511832 4.644±0.00 7.670±0.00 3.869±0.29 4.968±2.63 6.238±1.42 5.226±0.42 10.471±7.16 4.725±1.63 2.852±0.53 5.842±1.10 5.800±0.00 6.695±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001649 IDA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007165 TAS signal transduction
GO:0008285 IMP negative regulation of cell proliferation
GO:0010944 IDA negative regulation of transcription by competitive promoter binding
GO:0016020 IDA membrane
GO:0016575 IDA histone deacetylation
GO:0019899 IPI enzyme binding
GO:0030308 IMP negative regulation of cell growth
GO:0042826 IPI histone deacetylase binding
GO:0042981 TAS regulation of apoptotic process
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0050847 IDA progesterone receptor signaling pathway
GO:0060766 IDA negative regulation of androgen receptor signaling pathway
GO:0070062 IDA extracellular vesicular exosome
GO:0071354 IDA cellular response to interleukin-6
GO:0071897 IEA DNA biosynthetic process
GO:2000323 IDA negative regulation of glucocorticoid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125172 Phb-001 protein_coding Mus_musculus 0 630
ENSMUST00000036374 Phb-002 protein_coding Mus_musculus 0 573
ENSMUST00000146631 Gm7666-001 transcribed_processed_pseudogene Mus_musculus 0 555
ENSMUST00000117522 1700071K01Rik-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000117258 Gm7781-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000120392 Gm4773-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000119287 Gm9673-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000123071 Phb-004 processed_transcript Mus_musculus 0 436
ENSMUST00000121346 Gm11383-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000122108 Gm7841-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000123001 Phb-005 processed_transcript Mus_musculus 0 342
ENSMUST00000127031 Phb-003 processed_transcript Mus_musculus 0 191
ENSMUST00000162154 Fyb-006 processed_transcript Mus_musculus 2e-26 124
ENSMUST00000119416 Gm14834-001 processed_pseudogene Mus_musculus 6e-17 94

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