C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-minded family bHLH transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511871 SIM1-002 ENSG00000112246 9606 - 6:100462603-100464889 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENST00000511871
Transcript ID Bladder Muscle
ENST00000511871 4.896±0.00 0.714±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NG CIL_0007NG_0001 UCNEbase 6:99749802-100612540
CIL_0008SA CIL_0008SA_0001 VISTA 6:99910036-100511515
CIL_00097X CIL_00097X_0001 VISTA 6:100156252-100757191
CIL_0008V6 CIL_0008V6_0001 VISTA 6:100225935-100826717

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020071 Sim1-201 protein_coding Mus_musculus 0 351

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