C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ligand of numb-protein X 1, E3 ubiquitin protein ligase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000513421  |
LNX1-006 |
ENSG00000072201 |
9606 | - |
4:53573626-53701405  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001CS | CIL_0001CS_0001 | CGP | 4:52872982-54295272 |
| CIL_0007V9 | CIL_0007V9_0001 | VISTA | 4:52895307-53499113 |
| CIL_0001CL | CIL_0001CL_0001 | CGP | 4:53377643-54295272 |
| CIL_0001CM | CIL_0001CM_0001 | CGP | 4:53459301-54064690 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016874 | IEA | ligase activity |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000117388
|
Lnx1-006 | protein_coding | Mus_musculus | 0 | 379 |
|
ENSMUST00000087161
|
Lnx1-201 | protein_coding | Mus_musculus | 0 | 359 |
|
ENSMUST00000154928
|
Lnx1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 359 |
