Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
hs1460	VISTA	9606	4:52895307-53499113
Gene	Transcript	Position	Biotype
ENSG00000072201 (LNX1) ligand of numb-protein X 1, E3 ubiquitin protein ligase	ENST00000263925 (LNX1-001)	53460456-53591616	protein_coding
	ENST00000306888 (LNX1-002)	53459301-53558217	protein_coding
	ENST00000504299 (LNX1-004)	53573984-53617501	protein_coding
	ENST00000504605 (LNX1-005)	53574057-53652477	processed_transcript
	ENST00000507168 (LNX1-008)	53573955-53652477	protein_coding
	ENST00000510143 (LNX1-007)	53573704-53652513	protein_coding
	ENST00000511398 (LNX1-010)	53498773-53508383	retained_intron
	ENST00000512247 (LNX1-003)	53573731-53591765	protein_coding
	ENST00000513421 (LNX1-006)	53573626-53701405	protein_coding
ENSG00000145216 (FIP1L1) factor interacting with PAPOLA and CPSF1	ENST00000306932 (FIP1L1-003)	53377696-53459621	protein_coding
	ENST00000337488 (FIP1L1-001)	53377645-53459668	protein_coding
	ENST00000358575 (FIP1L1-002)	53377645-53459668	protein_coding
	ENST00000504094 (FIP1L1-010)	53428066-53460861	protein_coding
	ENST00000505125 (FIP1L1-004)	53377803-53459621	retained_intron
	ENST00000507166 (FIP1L1-005)	53377839-54295272	protein_coding
	ENST00000507206 (FIP1L1-013)	53458551-53459402	retained_intron
	ENST00000507922 (FIP1L1-009)	53377671-53428221	protein_coding
	ENST00000510668 (FIP1L1-015)	53378218-53389849	processed_transcript
	ENST00000511055 (FIP1L1-014)	53442253-53453131	retained_intron
	ENST00000511376 (FIP1L1-012)	53377643-53390597	processed_transcript
	ENST00000513008 (FIP1L1-008)	53425836-53459621	retained_intron
	ENST00000513975 (FIP1L1-006)	53377843-53440983	retained_intron
	ENST00000514543 (FIP1L1-011)	53382278-53459618	nonsense_mediated_decay
ENSG00000184178 (SCFD2) sec1 family domain containing 2	ENST00000388940 (SCFD2-002)	52873788-53366061	protein_coding
	ENST00000401642 (SCFD2-001)	52872982-53366075	protein_coding
	ENST00000503450 (SCFD2-003)	53352598-53366066	protein_coding
	ENST00000611795 (SCFD2-201)	53273579-53365941	protein_coding
ENSG00000248115 (RP11-752D24.2)	ENST00000504048 (RP11-752D24.2-003)	52945666-52948752	antisense
	ENST00000508813 (RP11-752D24.2-002)	52945689-52958087	antisense
	ENST00000510351 (RP11-752D24.2-001)	52945649-52951022	antisense
ENSG00000250930 (LNX1-AS1) LNX1 antisense RNA 1	ENST00000502373 (LNX1-AS1-003)	53496400-53500502	antisense
	ENST00000510785 (LNX1-AS1-001)	53500078-53523274	antisense
	ENST00000511989 (LNX1-AS1-002)	53501864-53549578	antisense
	ENST00000514364 (LNX1-AS1-004)	53501891-53539348	antisense

CIL_0007V9_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
hs1460	VISTA	10090	5:74131979-74735797
Gene	Transcript	Position	Biotype
ENSMUSG00000029227 (Fip1l1) FIP1 like 1 (S. cerevisiae)	ENSMUST00000080164 (Fip1l1-001)	74535449-74598790	protein_coding
	ENSMUST00000113534 (Fip1l1-007)	74535524-74592430	protein_coding
	ENSMUST00000113535 (Fip1l1-004)	74535497-74596145	protein_coding
	ENSMUST00000113536 (Fip1l1-003)	74535482-74596148	protein_coding
	ENSMUST00000120618 (Fip1l1-005)	74535493-74596206	protein_coding
	ENSMUST00000121950 (Fip1l1-008)	74535548-74596206	protein_coding
	ENSMUST00000122245 (Fip1l1-006)	74535485-74596119	protein_coding
	ENSMUST00000125129 (Fip1l1-011)	74594743-74595916	retained_intron
	ENSMUST00000135377 (Fip1l1-010)	74535485-74540566	retained_intron
	ENSMUST00000139697 (Fip1l1-009)	74586803-74591990	retained_intron
ENSMUSG00000049907 (Rasl11b) RAS-like, family 11, member B	ENSMUST00000051937 (Rasl11b-001)	74195288-74199481	protein_coding
ENSMUSG00000049907 (Rasl11b) RAS-like, family 11, member B	ENSMUST00000183995 (Rasl11b-002)	74195445-74196290	retained_intron
ENSMUSG00000062110 (Scfd2) Sec1 family domain containing 2	ENSMUST00000072857 (Scfd2-001)	74204816-74531742	protein_coding
	ENSMUST00000075848 (Scfd2-005)	74447780-74531747	nonsense_mediated_decay
	ENSMUST00000113542 (Scfd2-002)	74206093-74531619	protein_coding
	ENSMUST00000121330 (Scfd2-003)	74206128-74531742	protein_coding
	ENSMUST00000123203 (Scfd2-006)	74515163-74531742	processed_transcript
	ENSMUST00000142216 (Scfd2-007)	74458373-74479126	processed_transcript
	ENSMUST00000146015 (Scfd2-009)	74206089-74225484	retained_intron
	ENSMUST00000148994 (Scfd2-008)	74395135-74397738	processed_transcript
	ENSMUST00000151474 (Scfd2-004)	74456260-74531747	protein_coding
ENSMUSG00000080700 (Gm15981) predicted gene 15981	ENSMUST00000119196 (Gm15981-001)	74316566-74317029	processed_pseudogene
ENSMUSG00000084132 (Gm15982) predicted gene 15982	ENSMUST00000121681 (Gm15982-001)	74356566-74358415	processed_pseudogene
ENSMUSG00000085497 (Gm15985) predicted gene 15985	ENSMUST00000137731 (Gm15985-001)	74731517-74734450	lincRNA
ENSMUSG00000085657 (Gm15984) predicted gene 15984	ENSMUST00000155864 (Gm15984-002)	74703021-74713089	lincRNA
ENSMUSG00000085657 (Gm15984) predicted gene 15984	ENSMUST00000156466 (Gm15984-001)	74702599-74728605	lincRNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000072201

ENST00000263925

N/A

12.572±2.02

N/A

ENST00000306888

N/A

10.660±3.63

N/A

1.576±0.00

5.467±0.00

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

ENSG00000145216

ENST00000306932

N/A

15.805±0.00

12.019±0.00

ENST00000337488

N/A

20.547±0.00

ENST00000358575

N/A

5.688±0.00

N/A

4.019±0.00

N/A

N/A

N/A

N/A

N/A

N/A

9.973±0.00

N/A

29.238±0.00

N/A

N/A

N/A

N/A

N/A

N/A

ENSG00000184178

ENST00000388940

2.897±0.00

3.030±0.00

N/A

2.612±0.95

3.079±0.00

1.529±0.54

0.714±0.51

2.255±0.00

1.412±0.14

1.594±0.56

1.345±0.31

1.621±0.52

2.489±0.18

1.169±0.59

ENST00000401642

0.609±0.00

N/A

1.024±0.00

2.655±0.00

0.968±0.00

0.366±0.00

1.628±0.00

1.035±0.00

0.782±0.00

N/A

3.093±0.40

2.486±0.93

0.977±0.00

ENST00000503450

N/A

2.147±0.00

N/A

ENST00000611795

N/A

1.027±0.00

0.720±0.00

N/A

3.022±0.00

1.279±0.00

2.494±0.00

1.696±0.00

1.236±0.00

2.199±0.00

2.495±0.00

N/A

1.049±0.00

ENSG00000248115

ENST00000504048

N/A

0.706±0.00

0.120±0.00

N/A

0.208±0.00

N/A

0.113±0.00

0.518±0.00

N/A

0.066±0.00

0.359±0.00

ENST00000508813

N/A

0.105±0.00

0.296±0.00

N/A

0.036±0.00

0.015±0.00

N/A

0.219±0.00

N/A

ENST00000510351

N/A

0.010±0.00

N/A

0.096±0.00

0.029±0.02

0.137±0.00

0.164±0.00

0.049±0.00

0.063±0.05

0.271±0.00

N/A

0.083±0.07

0.055±0.03

0.380±0.00

ENSG00000250930

ENST00000502373

N/A

0.427±0.00

N/A

ENST00000510785

N/A

0.645±0.00

N/A

0.639±0.00

N/A

0.134±0.00

N/A

0.142±0.00

N/A

0.439±0.00

ENST00000511989

N/A

0.056±0.00

N/A

0.076±0.00

0.677±0.00

N/A

6.550±5.59

ENST00000514364

N/A

0.030±0.00

1.212±0.00

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000029227

ENSMUST00000080164

3.664±0.47

2.747±0.97

6.029±0.16

10.895±4.42

2.778±0.66

3.692±0.73

2.302±0.37

3.360±0.47

3.892±1.42

4.353±1.30

1.465±0.59

4.893±2.66

3.444±0.65

1.392±0.00

ENSMUST00000113534

N/A

2.508±0.00

ENSMUST00000113535

N/A

12.192±0.00

2.981±0.00

N/A

1.891±0.00

N/A

5.331±3.42

N/A

2.691±0.00

27.077±0.00

14.889±10.04

4.104±0.55

ENSMUST00000113536

5.055±0.38

N/A

4.589±0.56

10.155±0.00

2.492±0.00

N/A

2.827±1.21

2.640±0.53

5.449±2.67

3.468±0.59

3.266±0.72

9.539±4.57

10.251±3.05

4.469±1.19

ENSMUST00000120618

N/A

ENSMUST00000121950

N/A

9.279±0.00

9.135±0.00

2.833±0.24

ENSMUST00000122245

N/A

6.794±1.60

N/A

4.046±0.58

5.491±0.93

N/A

3.460±0.77

3.511±0.74

3.841±0.34

N/A

8.425±3.36

7.144±0.00

N/A

ENSMUST00000125129

N/A

18.815±0.00

ENSMUST00000135377

N/A

2.128±0.00

N/A

1.515±0.00

ENSMUST00000139697

N/A

15.346±0.00

N/A

ENSMUSG00000049907

ENSMUST00000051937

9.186±2.81

24.452±0.82

45.301±8.78

11.148±9.17

5.547±2.01

10.192±0.87

15.246±1.03

20.833±1.51

3.466±0.45

19.126±2.73

1.460±0.28

27.479±7.81

11.258±5.23

1.948±0.78

ENSMUST00000183995

N/A

ENSMUSG00000062110

ENSMUST00000072857

1.296±0.36

2.191±0.11

1.378±0.18

1.683±0.15

1.364±0.70

1.256±0.34

N/A

1.075±0.27

1.037±0.37

1.401±0.13

0.809±0.24

1.421±0.62

0.782±0.27

1.187±0.21

ENSMUST00000075848

1.267±0.11

2.104±0.46

N/A

1.445±0.32

1.513±0.36

0.429±0.00

0.801±0.31

0.617±0.07

0.970±0.29

N/A

1.945±1.09

N/A

ENSMUST00000113542

N/A

0.586±0.00

0.947±0.00

3.160±0.00

N/A

0.900±0.10

0.716±0.07

0.836±0.47

0.735±0.00

0.926±0.15

1.821±0.40

1.378±0.48

2.435±0.17

ENSMUST00000121330

2.086±0.40

1.888±0.40

1.331±0.49

2.293±1.22

2.170±1.08

1.811±1.21

1.664±0.32

1.674±0.62

1.471±0.42

1.828±0.26

1.002±0.18

1.854±0.57

2.140±0.71

1.306±0.14

ENSMUST00000123203

N/A

4.085±0.00

N/A

ENSMUST00000142216

N/A

ENSMUST00000146015

N/A

2.274±0.17

3.300±0.37

N/A

2.196±0.31

4.792±0.00

5.093±1.02

5.412±1.68

ENSMUST00000148994

N/A

ENSMUST00000151474

0.660±0.00

1.055±0.00

0.325±0.00

N/A

0.759±0.00

0.659±0.10

N/A

0.386±0.02

0.439±0.14

0.500±0.05

N/A

0.740±0.29

0.420±0.00

N/A

ENSMUSG00000080700

ENSMUST00000119196

N/A

0.215±0.00

0.037±0.01

0.337±0.00

0.220±0.05

0.384±0.00

0.109±0.00

N/A

1.072±0.95

0.121±0.00

0.127±0.00

0.440±0.03

0.136±0.03

0.156±0.06

ENSMUSG00000084132

ENSMUST00000121681

0.072±0.00

N/A

0.051±0.03

0.046±0.03

0.331±0.24

N/A

0.162±0.12

0.762±0.66

0.173±0.10

0.095±0.01

0.167±0.06

0.113±0.09

0.077±0.00

ENSMUSG00000085497

ENSMUST00000137731

N/A

0.211±0.00

0.407±0.00

N/A

ENSMUSG00000085657

ENSMUST00000155864

N/A

0.219±0.00

N/A

0.149±0.03

0.044±0.00

N/A

0.557±0.00

0.540±0.15

0.898±0.00

ENSMUST00000156466

0.172±0.09

0.055±0.00

0.595±0.09

N/A

0.154±0.05

N/A

0.061±0.00

0.062±0.04

0.006±0.00

0.031±0.00

0.093±0.05

0.124±0.09

0.023±0.02

0.026±0.01

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading