| Transcript ID | Breast |
|---|---|
| ENSMUST00000154928 | 3.344±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ligand of numb-protein X 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000154928  |
Lnx1-007 |
ENSMUSG00000029228 |
10090 | - |
5:74596944-74685865  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008RT | CIL_0008RT_0002 | VISTA | 5:74061294-74663523 |
| CIL_0007V9 | CIL_0007V9_0002 | VISTA | 5:74131979-74735797 |
| CIL_0001CS | CIL_0001CS_0002 | CGP | 5:74204816-74598790 |
| CIL_0001CL | CIL_0001CL_0002 | CGP | 5:74535449-74702911 |
| CIL_0001CM | CIL_0001CM_0002 | CGP | 5:74592446-75044774 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | IDA | ubiquitin-protein transferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0006511 | IDA | ubiquitin-dependent protein catabolic process |
| GO:0008270 | IEA | zinc ion binding |
| GO:0030165 | IDA | PDZ domain binding |
| GO:0042787 | IDA | protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| GO:0051260 | IDA | protein homooligomerization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000263925
|
LNX1-001 | protein_coding | Homo_sapiens | 0 | 955 |
|
ENST00000306888
|
LNX1-002 | protein_coding | Homo_sapiens | 0 | 955 |
|
ENST00000510143
|
LNX1-007 | protein_coding | Homo_sapiens | 0 | 291 |
|
ENST00000512247
|
LNX1-003 | protein_coding | Homo_sapiens | 0 | 268 |
|
ENST00000513421
|
LNX1-006 | protein_coding | Homo_sapiens | 0 | 359 |
