C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Wolf-Hirschhorn syndrome candidate 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000514329  |
WHSC1-024 |
ENSG00000109685 |
9606 | + |
4:1939661-1956188  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007TX | CIL_0007TX_0001 | VISTA | 4:1311752-1912379 |
| CIL_0006V8 | CIL_0006V8_0001 | CGP | 4:1811479-1982207 |
| CIL_0006V9 | CIL_0006V9_0001 | CGP | 4:1871424-2041903 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000066854
|
Whsc1-201 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000141416
|
Whsc1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 660 |
|
ENSMUST00000058096
|
Whsc1-002 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000137191
|
Whsc1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 660 |
|
ENSMUST00000139845
|
Whsc1-006 | nonsense_mediated_decay | Mus_musculus | 0 | 660 |
|
ENSMUST00000075812
|
Whsc1-001 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000114397
|
Whsc1-004 | protein_coding | Mus_musculus | 9e-38 | 161 |
|
ENSMUST00000142080
|
Whsc1-005 | protein_coding | Mus_musculus | 1e-36 | 158 |
|
ENSMUST00000114399
|
Whsc1-009 | protein_coding | Mus_musculus | 1e-36 | 158 |
