C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synuclein, alpha interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514497 SNCAIP-018 ENSG00000064692 9606 + 5:122312183-122403797 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KK CIL_0005KK_0002 CGP 5:122311354-122830108

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163742 Sncaip-004 protein_coding Mus_musculus 1e-34 150
ENSMUST00000025413 Sncaip-003 protein_coding Mus_musculus 1e-34 150
ENSMUST00000178011 Sncaip-005 protein_coding Mus_musculus 4e-34 148
ENSMUST00000178678 Sncaip-001 protein_coding Mus_musculus 4e-34 148
ENSMUST00000115410 Sncaip-002 protein_coding Mus_musculus 4e-34 148
ENSMUST00000180259 Sncaip-009 nonsense_mediated_decay Mus_musculus 1e-33 147
ENSMUST00000178883 Sncaip-007 nonsense_mediated_decay Mus_musculus 1e-33 147
ENSMUST00000177861 Sncaip-008 nonsense_mediated_decay Mus_musculus 1e-33 147
ENSMUST00000179038 Sncaip-012 protein_coding Mus_musculus 5e-23 111
ENSMUST00000179689 Sncaip-010 protein_coding Mus_musculus 4e-19 99
ENSMUST00000179625 Sncaip-011 protein_coding Mus_musculus 5e-18 95

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