| Transcript ID | Breast | Liver |
|---|---|---|
| ENSMUST00000177861 | 0.327±0.00 | 0.070±0.04 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synuclein, alpha interacting protein (synphilin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000177861  |
Sncaip-008 |
ENSMUSG00000024534 |
10090 | + |
18:52837964-52915586  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005KK | CIL_0005KK_0003 | CGP | 18:52767709-53220860 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261367
|
SNCAIP-002 | protein_coding | Homo_sapiens | 0 | 1485 |
|
ENST00000261368
|
SNCAIP-001 | protein_coding | Homo_sapiens | 0 | 1633 |
|
ENST00000379538
|
SNCAIP-201 | protein_coding | Homo_sapiens | 0 | 1485 |
|
ENST00000395466
|
SNCAIP-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 1493 |
|
ENST00000395469
|
SNCAIP-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 1328 |
|
ENST00000414317
|
SNCAIP-202 | protein_coding | Homo_sapiens | 0 | 1663 |
|
ENST00000504884
|
SNCAIP-203 | protein_coding | Homo_sapiens | 0 | 1483 |
|
ENST00000506272
|
SNCAIP-016 | protein_coding | Homo_sapiens | 2e-33 | 147 |
|
ENST00000508017
|
SNCAIP-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 1633 |
|
ENST00000508681
|
SNCAIP-017 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000509023
|
SNCAIP-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 1864 |
|
ENST00000509154
|
SNCAIP-010 | protein_coding | Homo_sapiens | 0 | 1482 |
|
ENST00000509652
|
SNCAIP-015 | protein_coding | Homo_sapiens | 7e-27 | 124 |
|
ENST00000510003
|
SNCAIP-005 | retained_intron | Homo_sapiens | 0 | 237 |
|
ENST00000510658
|
SNCAIP-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1629 |
|
ENST00000512146
|
SNCAIP-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1493 |
|
ENST00000512385
|
SNCAIP-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 1485 |
|
ENST00000513719
|
SNCAIP-013 | retained_intron | Homo_sapiens | 0 | 1469 |
|
ENST00000514467
|
SNCAIP-019 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000514497
|
SNCAIP-018 | protein_coding | Homo_sapiens | 1e-33 | 147 |
|
ENST00000515215
|
SNCAIP-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 1493 |
|
ENST00000542191
|
SNCAIP-204 | protein_coding | Homo_sapiens | 0 | 1483 |
