C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515064 LDB2-007 ENSG00000169744 9606 - 4:16501541-16898562 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLungMuscleOvaryPlacentaTestisENST00000515064
Transcript ID Bladder Brain Breast Colon Lung Muscle Ovary Placenta Testis
ENST00000515064 1.631±0.00 8.072±0.15 1.843±0.00 3.885±0.00 9.548±0.00 1.491±0.00 5.233±0.00 4.510±2.73 1.954±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033W CIL_00033W_0003 CGP 4:16160505-16898809
CIL_00033T CIL_00033T_0002 CGP 4:16501541-17512234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003712 IEA transcription cofactor activity
GO:0005634 IEA nucleus
GO:0030274 IEA LIM domain binding
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070748 Ldb2-201 protein_coding Mus_musculus 0 2178

Loading