C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | collagen, type IV, alpha 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000515658  |
COL4A5-009 |
ENSG00000188153 |
9606 | + |
X:108681877-108696762  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000172 | CIL_000172_0002 | CGP | X:108155607-108697545 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005201 | IEA | extracellular matrix structural constituent |
| GO:0005581 | IEA | collagen trimer |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000130732
|
Col4a5-003 | protein_coding | Mus_musculus | 0 | 449 |
|
ENSMUST00000112930
|
Col4a5-002 | protein_coding | Mus_musculus | 0 | 449 |
|
ENSMUST00000112931
|
Col4a5-001 | protein_coding | Mus_musculus | 0 | 449 |
|
ENSMUST00000128669
|
Col4a5-004 | processed_transcript | Mus_musculus | 0 | 206 |
