C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type IV, alpha 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130732 Col4a5-003 ENSMUSG00000031274 10090 + X:141630124-141689234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverMusclePlacentaTestisENSMUST00000130732
Transcript ID Adipose Bladder Brain Breast Colon Liver Muscle Placenta Testis
ENSMUST00000130732 0.278±0.00 5.117±0.00 0.836±0.04 0.801±0.05 2.396±0.69 0.109±0.03 0.191±0.06 0.543±0.46 0.458±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000172 CIL_000172_0003 CGP X:141165403-141689234
CIL_0002ST CIL_0002ST_0002 CGP X:141475385-141725263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328300 COL4A5-006 protein_coding Homo_sapiens 0 3230
ENST00000361603 COL4A5-001 protein_coding Homo_sapiens 0 3302
ENST00000483338 COL4A5-002 retained_intron Homo_sapiens 0 680
ENST00000489230 COL4A5-003 retained_intron Homo_sapiens 0 676
ENST00000504541 COL4A5-010 protein_coding Homo_sapiens 0 444
ENST00000505728 COL4A5-011 protein_coding Homo_sapiens 0 520
ENST00000515658 COL4A5-009 protein_coding Homo_sapiens 0 449

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